Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_1051 |
Symbol | |
ID | 7172952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 1283869 |
End bp | 1284516 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643539563 |
Product | TPR repeat-containing protein |
Protein accession | YP_002435474 |
Protein GI | 218886153 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4235] Cytochrome c biogenesis factor |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCAGA CAAACCGAGC GCAGGGCCGT CAGCAACAGG ACGGCGACTA CGTCCGCAAG TCCACCATGT ACATGGCCGT GGCCGTGGCG CTGGTCGTTG GCGCGTTCCT TGGCGTGCAG GTGACGAGCC TGTATTCGCC CGCGCCCGCG CAGGAAAAGC GCGCCGTGTC CGCCCCCAGC CAGCAGTCCC AGAACGGCCC GGCCAACCAG ATATCGCCCG ACGTCATGGG CCGCATTCTG GAAATGGAGC AGGCGGTGCT GAAAGACCCC AACGACGTGG CCGCATGGAC CAAGCTGGGA CACCTGTACT TCGACACCGA CCAGCCCAAG AAGGCCATCC CCGCCTACGA GAAGTCGCTG GCGCTCAAGC CCAACGACCC GGACGTGCTG ACCGACCTTG GCGTGATGTA CCGCGAAGAC CACCAGCACG ACCGCGCCCT GGCCACCTTC GAGAAGGCCA TTGCCGCCAA TCCCAAGCAC CAGATTGCCC GCTTCAACAA GGGCATCGTG CTGTACTTCG ACCTGGAACG GAAGGACGAC GCCTTGAAGG CCTGGCGCGA ACTGCTGGCC ATCAACCCCG ACGCCAAGGC CCCCAACGGC CAGCCGCTGA AGGAAATGAT GCAGTCGTTG CAGCAGCAGA GCAAGTAG
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Protein sequence | MSQTNRAQGR QQQDGDYVRK STMYMAVAVA LVVGAFLGVQ VTSLYSPAPA QEKRAVSAPS QQSQNGPANQ ISPDVMGRIL EMEQAVLKDP NDVAAWTKLG HLYFDTDQPK KAIPAYEKSL ALKPNDPDVL TDLGVMYRED HQHDRALATF EKAIAANPKH QIARFNKGIV LYFDLERKDD ALKAWRELLA INPDAKAPNG QPLKEMMQSL QQQSK
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