| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1048 |
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| Symbol | |
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| ID | 7172944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1273441 |
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| End bp | 1275138 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539555 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_002435471 |
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| Protein GI | 218886150 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 84 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAG CCCGCCGCAT CGCCGCGCGT TTTCGTCCGT CCCCTGTTCC GCAAACCTCC
AACCGGCAGC GCTCTCCGCG CCGCGCGGCA CGCCTGGCGC TTGTCGCCCT GCTGGCGGCT
GGCCTGCTGC TGGGCGGATG CAAGCCCCCC AAAAAGGGGA CGGCTGCCCT GCCGGAACGC
CCTACCTACA TCCGCGAGGC CACGGACCAG GAAACTTCCG CGCCCGATGC GGGCACGAGC
GCCACGGGCA CGACCGGGGC CACCACGCCG GATACCGGCG CCGCACCGGC TGATACCGGG
GCCAACACCG CGCAGCCTGC CGCCCCCGAT CTTGTGGTCG CCCCTGACAG CATGGCCAAC
AACCGCCAGC CCGAACCCAC GCCGCAACCG CAGAACCGCG CTGCCGCCCC CGTGGGTGAA
CTGGTGGAGC TTTCCGACGG CACCAGCATG GAGGCCCCCA CTCGCCCGCA GGACCAGTTT
GCCTTTGCCA TGGCCCTGTT GCAGGGGGCC GACGGCCAGC CCGATCCGGC CCGGGCCGCA
ACGTGGCTGG AAAAATCCGC CGATCAGGAC TTTGGCCCGG CGCAAGACGT GCTGGCGCGC
CTGTACCTGG ACGGCACCGG CGTGCGCAAG GACGAGGCCA AGGCCTTTGC GCTGGCCATG
TCCGCCGCCG AGCAGGACAT CATCAACGCG CAGGCCCTGG TGGGCGTGCT GTACACTTAT
GGACGCGGCA CCCGGCGCGA CTTCATGCAG GGCGAGAAAT GGCTCTCGCT GGCGGCGGAG
CGGGGCCACC CGCAAGCGTG CGACCTGCTG GCCGAATACC ACCGCAAGGG GTTGGCCGGG
CCGGAGAACC AGGAAGAAGC CTTCCGCTGG ACGGAACGCG CCGCCGCCCT TGGGGTGGTG
CGCGCACGCT TCTGGCTGGG CGTGCACTAC CGCTACGGCA TGGGCACCCC GCGCGACGAC
GCCAAGGCCC TGCACCTGCT GCGCGAAGCC GCCGACGCGG GCAACCCCGA CGCCATGGGG
CTGGTGGCCG AAATGCTTTA CCGGGGCCAG GGAAGCGAGC CGGACATGGC TGGCTCCGTG
CGCTACTTCC AGATGGGCGC CAAGGCGGGC GACCTGCACT CGCTGCTCAA CCTGGGCATC
CTGCATCACG AAGGCACAGG CGTGCCCAAG GACTACCCGC GCAGCCTGCA ACTGTTCGGC
CAATGCGCCG AGGGCGGCCA CCCGCGCTGC ATGACCTTGC TGGGCAGCAT GCTGGCGGAA
GGGGAAGGAG CCGAGGCGGA CATGGTCACC GCCCATTCCT GGCTGACCCG TGCCGTGCTG
TTCGGCGACG GCGACGCGGC TTCGGTGGCA GCCGAGGTGC AGCAACGCAT GACGCCCGAC
CAGTTGGTGC ATTCCAAGAA CATGGCCGCG CAGTGGATGC AGGCCCACCC GCAGTTCCAG
CCCGGCGTGC CCGCGCAACT CGAACCGGAG GCATCCACGG CGGTTCCGCA GGCCGCGCGA
CAGGAAGCCT CGCAATCCGC ACCGGGAGCA AGCGCCGACA CCGGCACGAC GGACATGACC
GCCACACCGC AGGGTTCCTC CAACGCGACG GCCCCTGTTA CCCAGACCGA CAAGACCGGC
AAGACGGGCA CCACCACTGC GGCCCCGGCG AAGAAGAAAG GCACCAAGGC CGCCAAGGGC
GCCCGCACCA CCAACTGA
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| Protein sequence | MNTARRIAAR FRPSPVPQTS NRQRSPRRAA RLALVALLAA GLLLGGCKPP KKGTAALPER
PTYIREATDQ ETSAPDAGTS ATGTTGATTP DTGAAPADTG ANTAQPAAPD LVVAPDSMAN
NRQPEPTPQP QNRAAAPVGE LVELSDGTSM EAPTRPQDQF AFAMALLQGA DGQPDPARAA
TWLEKSADQD FGPAQDVLAR LYLDGTGVRK DEAKAFALAM SAAEQDIINA QALVGVLYTY
GRGTRRDFMQ GEKWLSLAAE RGHPQACDLL AEYHRKGLAG PENQEEAFRW TERAAALGVV
RARFWLGVHY RYGMGTPRDD AKALHLLREA ADAGNPDAMG LVAEMLYRGQ GSEPDMAGSV
RYFQMGAKAG DLHSLLNLGI LHHEGTGVPK DYPRSLQLFG QCAEGGHPRC MTLLGSMLAE
GEGAEADMVT AHSWLTRAVL FGDGDAASVA AEVQQRMTPD QLVHSKNMAA QWMQAHPQFQ
PGVPAQLEPE ASTAVPQAAR QEASQSAPGA SADTGTTDMT ATPQGSSNAT APVTQTDKTG
KTGTTTAAPA KKKGTKAAKG ARTTN
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