| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1036 |
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| Symbol | |
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| ID | 7172932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1258166 |
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| End bp | 1258774 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539543 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002435459 |
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| Protein GI | 218886138 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 79 |
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| Fosmid unclonability p-value | 0.962851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCTGC TGGCGGCGGC TCTGACGCTG GCCCTTGCCG TACCTGCCGG GGGTATCGGC
GGCCTTGTCC GCCCCGCCGC CGCGGCACCC GCTGGAGAAG TCGTCACCAT CTACCGCTAC
GTGGACGAGG ACGGCGTGGT GCACCTGACC GACAAGCCAA AGGGCGACAC GCGCTACCGT
GTGTTCGGGC GGTTCCGGGT GCAGGAACTG GTGAAGGCCG TGGGGCCGGT GGGCATCAAG
GGGCTGGCCG CCAAGCACGG CGCGCGCCAC GGCGTGGACC CGCGCCTGGT GGAAGCGGTG
ATTGCCGTGG AATCGAACTA CGACCCCACG GCGGTTTCGC CCGCCGGGGC GCAGGGGCTG
ATGCAGATCA TGCCCGGCAC CCAGCGCGAC CTGGGGGTTT CCGCGCCGTT CGACGCCGAT
GCCAACGTGG AAGGCGGCGT GCGCTACCTG AAATCCCTCA TGGACCGCTT CGGCGAGTTG
CCGCTGGCGC TGGCCGCCTA CAACGCCGGG CCGGAACGGG TGGCGAAGCA CGGCGGCATT
CCGCCCATAC CGGAAACGCA GCAGTACGTG ACCAAGGTGA TGGATACCTA TGCCCGGCTT
TCGCGGTAG
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| Protein sequence | MALLAAALTL ALAVPAGGIG GLVRPAAAAP AGEVVTIYRY VDEDGVVHLT DKPKGDTRYR
VFGRFRVQEL VKAVGPVGIK GLAAKHGARH GVDPRLVEAV IAVESNYDPT AVSPAGAQGL
MQIMPGTQRD LGVSAPFDAD ANVEGGVRYL KSLMDRFGEL PLALAAYNAG PERVAKHGGI
PPIPETQQYV TKVMDTYARL SR
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