Gene DvMF_1020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1020 
Symbol 
ID7172915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp1236422 
End bp1237498 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content71% 
IMG OID643539526 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002435443 
Protein GI218886122 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value0.773796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACAACAGAAC ACCCCGGACG GTGACCGACG AGCCACGCCT GCTGGACGTG 
CGCGACCTGA GCGTGGAATT TCCGGGGCGG CCCGAGGCGG ACGGCACGCC GGGCGCTCCC 
CTGCGCGCCG TGGCGGGGAT ATCCTTTTCC ATAGCGCCGG GGGGCACGCT GTGCCTGGTG 
GGCGAATCGG GCTGCGGCAA GAGCATGACT GCGCTGGCCC TGCTGCGCCT GGTGCCCGAG 
CCGGGGCGCG TTGCCTCCGG GTCGGTGCGG CTGGAGGGGC GGGAACTGCT GACCCTGCCG 
GAACCGGAAA TGCGCGGAGT GCGCGGGCGC AGCATTTCGA TGATCTTTCA GGAGCCCATG 
ACCTCGCTGA ACCCGGTGTT CCGGGTGGGC GAGCAGATTG CCGAGGGGGT GCGGCTGCAT 
CTGGGCCTTT CCCGGTCCGA TGCAGCCGCG CGCGCCGTGG ACCTGCTGCG ACAGGTGGGC 
ATTCCCTCGC CGGAACTGCG CGCCCGCGAC TTTCCGCACC AGATGAGCGG CGGCATGCGC 
CAGCGGGTGA TGATCGCCAT GGCGCTGGCC TGCGACCCGC GCCTGCTCAT CGCCGACGAA 
CCCACCACCG CGCTGGACGT GACCATCCAG CGCCAGATAC TGCGCCTGAT GCGCGACCTT 
GCCGCCCACA GGGGGGCATC GGTGCTGCTG ATCACCCACG ACCTCGGCGT GGTGGCGGAA 
ACCGCCGACC ACGTGGCCGT GATGTATGCG GGCAGGATCA TGGAACATGC GTCGGTGGGT 
GATTTTTTCG CGCGCCCGCT GCATCCCTAT GCCCAGGGGC TGATGCGCTC GGTGCCGCAG 
GCCGTTTCCG GCCCGAGGGC CGAACGGCTG TCGGCCATTC CGGGCACGGT GCCGCCGCTG 
TGGGCCCTGC CATCCGGCTG CACCTTCCGT GACCGTTGCC CGCACGCCTT CGCCCGGTGC 
GCCGAGCAGG AACCGCCCCT GCTGGCCATG CCGCCACAGG CACTCGCCGC CACTCCCACG 
GACAACGCGG CGCAGGCGCA CGGCGTGCGC TGCTGGCTGC ACGCCCCCAA GAAATGA
 
Protein sequence
MTDDNRTPRT VTDEPRLLDV RDLSVEFPGR PEADGTPGAP LRAVAGISFS IAPGGTLCLV 
GESGCGKSMT ALALLRLVPE PGRVASGSVR LEGRELLTLP EPEMRGVRGR SISMIFQEPM 
TSLNPVFRVG EQIAEGVRLH LGLSRSDAAA RAVDLLRQVG IPSPELRARD FPHQMSGGMR 
QRVMIAMALA CDPRLLIADE PTTALDVTIQ RQILRLMRDL AAHRGASVLL ITHDLGVVAE 
TADHVAVMYA GRIMEHASVG DFFARPLHPY AQGLMRSVPQ AVSGPRAERL SAIPGTVPPL 
WALPSGCTFR DRCPHAFARC AEQEPPLLAM PPQALAATPT DNAAQAHGVR CWLHAPKK