| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_1010 |
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| Symbol | |
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| ID | 7172905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1225022 |
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| End bp | 1226287 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643539516 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002435433 |
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| Protein GI | 218886112 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 0.905477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAACG TTCGTTCCAC GTACACCGAT GCGGTCGGCT TCTTTGGCCG GACCACGCCC
GAAGAACTGG CGGCCGCCTT CGGCAGCCCC CTGTACGTCT ACAGCGAGGC CCTGCTGCGC
AAGCGCTGCC GCGACATGAA GGCCCTGTCG TCGCATCCCG GCTTTTTCGT GAACTATTCG
GCCAAGGCCA ACACCAACCT TTCCCTGCTG CGCATCGTGC GCGAGGAAGG GCTGGTGGTG
GACGCCATGT CGCCCGGCGA AATCCACGTC AACAAGGCCG CCGGGTTCAC CCCGGACCAG
ATCCTGTACG TGTGCAACAA CGTGTCCGAG GCGGAACTGG CCAACGCCGT GTCGCATGGC
CTTCTGGTGA GCGTGGATTC GCTGTCGCAG CTCGAAACCC TGGGCAGGGT GAACCGGGGC
GGCAAGGTGA TGGTGCGCTT CAACCCCGGC ATCGGCGCGG GGCACCACCA GAAGGTGGTC
ACGGCGGGCA AGGCCACCAA GTTCGGCGTG GACCCCTCCG AGGCCTCGCT GGCCGAGTTG
CGGGCCATTC TGGCCAGACA CGACATGACC CTGGCGGGCA TCAACCAGCA CATCGGCTCG
CTGTTCCTCG AACCGGAAGG CTACGTGGCG GCGGCGGACT TCCTGCTGTC CGTGGCGGAA
AAGTTCGACA CCGTGGAGGT CATCGACTTC GGCGGCGGCT TCGGCATTCC GTATCGCAAG
TACGAGGACC AGCCCCGGCT GGACCTGGCC GCCACGGCGG AACGCCTGCA CGCGCTCATT
TCCGGCTGGT CGGAACGCAC CGGCTACAAG GGCCGCTTCT ACATCGAGCC GGGCCGCTAC
GTGGTGGCCG AATGCGGCCT GCTGCTGGGC ACCGTGCACG CCACCAAGAA CAACGGCCCC
ACCCGCTACG TGGGCACCGA CCTTGGCTTC AACGTACTGG CCCGCCCGGT GATGTACGAC
GCGCACCACG ACATCGAGGT GTACCGCAAT AACGGAACGC CCGACGCGGC CCTGCACCCC
CAGACCGTGG TGGGCAACAT CTGCGAGAGC GGCGACATCA TGGCCAGGGA ACGGCAGCTG
CCCGCCATCC AGGAGGGCGA CATTCTGGGC GTGCTGGACG CCGGGGCCTA TGGCTACGCC
ATGAGCTCCA CGTACAACCA GCGGTTGCGC CCCGCCGAGG TGCTCATCGG CCTTGATGGT
GAGCCCCGCC TGATTCGCCG CCGGGAAGAG TTGGCCGATC TGATGGCCCT TTTTCCCGAT
GCGTAG
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| Protein sequence | MPNVRSTYTD AVGFFGRTTP EELAAAFGSP LYVYSEALLR KRCRDMKALS SHPGFFVNYS
AKANTNLSLL RIVREEGLVV DAMSPGEIHV NKAAGFTPDQ ILYVCNNVSE AELANAVSHG
LLVSVDSLSQ LETLGRVNRG GKVMVRFNPG IGAGHHQKVV TAGKATKFGV DPSEASLAEL
RAILARHDMT LAGINQHIGS LFLEPEGYVA AADFLLSVAE KFDTVEVIDF GGGFGIPYRK
YEDQPRLDLA ATAERLHALI SGWSERTGYK GRFYIEPGRY VVAECGLLLG TVHATKNNGP
TRYVGTDLGF NVLARPVMYD AHHDIEVYRN NGTPDAALHP QTVVGNICES GDIMARERQL
PAIQEGDILG VLDAGAYGYA MSSTYNQRLR PAEVLIGLDG EPRLIRRREE LADLMALFPD
A
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