Gene DvMF_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_1000 
Symbol 
ID7172895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1215217 
End bp1216215 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content71% 
IMG OID643539506 
Productbiotin/acetyl-CoA-carboxylase ligase 
Protein accessionYP_002435423 
Protein GI218886102 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0340] Biotin-(acetyl-CoA carboxylase) ligase 
TIGRFAM ID[TIGR00121] birA, biotin-[acetyl-CoA-carboxylase] ligase region
[TIGR00122] BirA biotin operon repressor domain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACACAG ACAGGACGCC CACGAAGGGA CGTGTGTTCG CCATGTTGCG CGAAGCGGGC 
GGCAACTGGC GGTCGGGAGA GGAACTTTCA CGGTTGCTTG GCGTAAGCCG GGCCGCCGTG 
GCCAAGCACG TGCGGACGCT GCGCGGTGAA GGGCACCAGA TCGAGGCCAT GACCCGCCGG 
GGATACCGGA TGCTGGCCGA AGCCGACGTG CTGACCGTTG ACGGGGTCCG CCGGGGGCTG 
CGCACCCGCT GTTTCGGGCA GGGGGATTTT GTCCTGCACG AATCCACCGA ATCCACCAAC 
CGCGAGGCCG CGCTGCTGGC CCTGGGCGGC GCCCCAGAGG GCACCGTGGT GGCGGCATCG 
GCGCAGACCG CCGGACGCGG ACGCGCCGGT CGCGTCTGGG CGTCGCCCGC CGGGGTGGGG 
GTGTACGTTT CGCTGGTGCT GCGGCCTCGT CTTGCCCCGC AGGCCGCGCC GCTGGTCACC 
CTGATGACCG CCGTGGCCGT GGCCGAGGCG GTGGCCGAGG TCACCGGCCT TGCCCCGCGC 
GCCAAATGGC CCAACGACGT GCTGCTGCAT GGCCGCAAGG TGTCGGGCAA CCTGACCGAG 
GTGGCTCTGG TGGCCGATGC CGTGTCCCAC GTGGTCACCG GCGCGGGCAT CAACGTGAAC 
ACCCGCGTCG AGGATCTGCC CGAAGACCTG CGCGGCAAGG CCACCTCGCT GGCGGCGGAA 
CTGGGCCGCC CCGTGTCGCG GGTGGACGTG CTGCGCGCCT TTCTGGAACG GGCCGAGCAC 
TGGTACGCCG CCCTGCGCGA GGGCGACCCC GGCCCGGTCA TCGCCCGCTG GAAGGAGCTT 
TCCGCCATCG TCGGCACCCC CTTGCGGGTG GGCACGCCGC ACGGCGTGGT GGAAGGGCTG 
GTGGCCGATG TCGATCCCGA CGGCCTGCTG CGCCTGGTGG ATGCCGATGG GAGCGAACAT 
CGCCTGCATG CGGGCGATGT CATTGACAGC AGGCTGTAA
 
Protein sequence
MDTDRTPTKG RVFAMLREAG GNWRSGEELS RLLGVSRAAV AKHVRTLRGE GHQIEAMTRR 
GYRMLAEADV LTVDGVRRGL RTRCFGQGDF VLHESTESTN REAALLALGG APEGTVVAAS 
AQTAGRGRAG RVWASPAGVG VYVSLVLRPR LAPQAAPLVT LMTAVAVAEA VAEVTGLAPR 
AKWPNDVLLH GRKVSGNLTE VALVADAVSH VVTGAGINVN TRVEDLPEDL RGKATSLAAE 
LGRPVSRVDV LRAFLERAEH WYAALREGDP GPVIARWKEL SAIVGTPLRV GTPHGVVEGL 
VADVDPDGLL RLVDADGSEH RLHAGDVIDS RL