| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0999 |
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| Symbol | |
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| ID | 7172894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1213568 |
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| End bp | 1214989 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539505 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_002435422 |
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| Protein GI | 218886101 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCAGC ACGCGCGCCC GCAGGGCGAC GACGCTTCCT ATCGCGGCAT CTGGCGGCTG
ACATGGCCCC AGATGCTGAT GATGCTTTTC CACTTCCTCA TCGGGTTCAC CGACGTGTGG
GTGGCGGGCC GCATCCAGCC AGAGGTGCAG GCCGCCATCG GTCTTGTCTC GCAGTGCCTG
TTCTTTCTGC TGGTGGTTGC CGTGGCCGGG GCCAACGCCG GGGTGGCGGC CATCAGCCAG
GCGCTGGGCG CGGGGCTGCT GCCGCGTGCC CGGCGCTACG CGGGCATGGT GCTGGCCGGG
GGCTGCACGG TGGGCGTGGG CATCATGCTG CTGGGGCTGG GCACCATAGA GCCCTTCCTG
CGGCTGTTGC AGGTGCCGGA ACCGGTCATG CCGGTGGCCT CGTACTTCTG GAAGGTGTAC
CTGCTGGGCC TGCCCGCCAA CTATCTGTTC ACCATCACCG GGGCGGTGTT CCGCGCCCGC
AAGCGCATGA TCGCGCCGCT GCTGTCCATG GTGGCGGTGT GCGTCGTCAA CGCCGGGGGC
ACCCTGGGGT TCGGCCTGGG GCTGTGGGGC CTGCCCGCCT ACGGCTACGC CGGGGTGGCC
TGGGCCACGT TCGTGGCCAT CGTCGTCGGG GCCTTGCTGA ACCTTGGCAT GCTGGCCCGC
GACCACGAGC TGTTGCAACG CGCCTCGTTT CCCCCCTTGC GCTGGATGCG GCGCGGCGCG
CCCTACCTGT TCCGCGTGGC CGCGCCTGCC GCCGGGCTGC AAATCATGTG GAACCTCGGC
TACCTGGTGC TGTTTTCCAT CACCGCGTCG TTGCCCGTGG ACAGCGTGGC GGCCCTTGCG
GGCATGACGG CGGGCATGCG CGTCGAGTCG TTCATCTTCC TGCCCGCGCT GGCCTTCAAC
ATGACCGCCT CGGTGCTGGT GGGCCATCTG CTGGGCGCGG GCCGCAAGCC CGAGGCGGTG
CGGGTAAGCC TGCGCCTGCT GGGCATCGGC TGCGCATCCA TGAGCGTGTT CGCCGTGCTG
CTGTGGCCAT GGACGGCGGA CATCGCCGCC TGGCTGGCCC CGGAACCCGC CGTGGCCGTG
CAGGTGGTCA GCTATCTGCG CTACAATCTT GTTTCCATTC CCTTCACCGT GGCCAGCATG
ACCCTGGGCG GGGTCATGAC CGGCGCGGGC GCCACCCTGT ACTCCTTTCT GGTGTACGGT
TCGGCCACGT GGTTCGTGCG GCTGCCGCTG GCATGGGGCA TGGGCCATGT GGTGTGGCGC
GATGCGGCGG GGATATTTCT TGCCATGTTC GTTTCCCAGG TGTTCCAGTC TCTGGTCATG
CTGTGGTTGT TTCATACGCA CGACTGGAGC CGGTTCAGCA TGATCCGGCG CAATGGCCGC
AAGGCCGCGC CACAAGGAGC AGCCTCGCAT GACCGACAGT GA
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| Protein sequence | MSQHARPQGD DASYRGIWRL TWPQMLMMLF HFLIGFTDVW VAGRIQPEVQ AAIGLVSQCL
FFLLVVAVAG ANAGVAAISQ ALGAGLLPRA RRYAGMVLAG GCTVGVGIML LGLGTIEPFL
RLLQVPEPVM PVASYFWKVY LLGLPANYLF TITGAVFRAR KRMIAPLLSM VAVCVVNAGG
TLGFGLGLWG LPAYGYAGVA WATFVAIVVG ALLNLGMLAR DHELLQRASF PPLRWMRRGA
PYLFRVAAPA AGLQIMWNLG YLVLFSITAS LPVDSVAALA GMTAGMRVES FIFLPALAFN
MTASVLVGHL LGAGRKPEAV RVSLRLLGIG CASMSVFAVL LWPWTADIAA WLAPEPAVAV
QVVSYLRYNL VSIPFTVASM TLGGVMTGAG ATLYSFLVYG SATWFVRLPL AWGMGHVVWR
DAAGIFLAMF VSQVFQSLVM LWLFHTHDWS RFSMIRRNGR KAAPQGAASH DRQ
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