Gene DvMF_0991 details

Gene Information

• Locus tag: DvMF_0991
• ID: 7172886
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1204387
• End bp: 1206210
• Gene Length: 1824 bp
• Protein Length: 607 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 643539497
• Product: signal transduction histidine kinase, nitrogen specific, NtrB
• Protein accession: YP_002435414
• Protein GI: 218886093
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3852] Signal transduction histidine kinase, nitrogen specific
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 76
• Fosmid unclonability p-value: 0.964598
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGAAGC GTTCTGACGA CCTGCGGGCA AAGCTCATCG GGCTCGGGCA GGCCTCCACG 
CGCAAGAGCT ACTACCCGGA ACTGAAAGAG CGTCTCCAGC AACTGGAACT GTTCCGCGCC 
CTGCTGGAAA GCGCAGGCGA CGGCGTGCTG CTGCTGGCCG CGGAAACCCT GCTGGTGCTG 
GACGCCAACG GCGCTGCCTG CCGCTTCGCG GGGCTGCCAT GGGAAGCGCT GACCGGTCGC 
CCGCTGGCGA CGGCGTTTCC CGAACTGGCC GGGTGGAAGC CACATCTCGC AGGCAACGCG 
GAAGGCTTTG TGCCGCAGGA CGGACCGCGC ACCGGCGGCT GGCACATGGC CGATGCCGCC 
CCCCCTGCCG GGGGCGAGGA ACGCCGCCTG ATCCGCCAAC CCTCGCACGG GGCCGACCTG 
TGGCTGGAAC TGGCCCTGAA ACGCCACGAC ATCGGCGGCA TGCAGTATGT CTCGTGCATC 
GCGCGCGACG TGTCGGAACG GCTGCGCGCC GAAGAAGAAC TGCGCGAGAG CGAGCGCAAG 
TACCGCGCGC TGTTCGAGGC GGCCAACGAC GCCATTTTCC TGATCCGCGA CGGCCTTGTG 
CGCGACGCCA ACCGCAGGGC CTGCGAGCTG TTCGGCAGAT CCCTGGACCA GTTGACCTCC 
ATGGCCCCGC GCGACCTTTC GCCGCCAGAG CAGCCCCGCT CCGGGGCCAC CCACCTTGCC 
GAGGACATCC ACCTGGCCAA GGCCCAGGCC GGAGAGCCGC AGTTCTTCGA ATGGACGCAT 
CTGCGCGCGG ACGGCACCCC CTTCGACTGC GAAATTTCCC TCAGCCGCTT CACCCTGCGG 
GGCGAGCCAT GGCTCATCGC CATCATCCGC GACGTGACCG AGCAGAAGAA ACTGCGCGAA 
ATCATGGTCC AGACGGAAAA GATGATGTCC GTGGGGGGCG TGGCCGCCGG CATGGCCCAC 
GAGATCAACA ACCCCCTCTC GGCCATCGCC CAGTCCGCCC AGAACCTGCA ACGCCGCCTG 
ACGCCCGGCG TGCCGGACAA CGAAGCCGCC GCCCTGATAT CCGGAGTGGA CCTGGAACGG 
GTGCAGCACT ACTTCGAGTT GCGCGGACTG GCCAAGCTGG TGAGCAACAT CCGCGAGGCC 
TGCGCCCGCG CGGCGGACAT CGTGCGTCAC ATGCTGGACT TTGCCCGGCG CAGCGACGCA 
GAACGCGCCG CATGCGACCT TGCGGTACTG CTGGACCGGG CCGTGGAACT GGCGGAGAAC 
GATTACAACC TCAAGAAGCG CCACGATTTC CGCAACATCC GCATCGTCCG CGACTACGCG 
CCCGGCGCTC CCATGGCGGA ATGCGCTCCC ACCGAAATCG AGCAGGTGTT GTTCAACCTG 
CTGAAAAACG CCTCGCAGGC CATTTCGCAA AAGGCCTACC CGCAGGGCGA GGCGCCGTGC 
ATCACCTTGC GCGTCGGCAC GCGGTGCGGC GCGCCGGGCC TGCCCGGCGG CCTCAGCGGC 
CTCGGCAGCG CGGACGGTGT CATGGGGATG GGGGAAACCG AAGACCCGGG CGAACCCGAG 
GCGGCGGACG CCGCACCGGC CAACACGGAA TACGTCTGCG TGCAGGTGGA GGACAACGGC 
CCGGGCATGG ACGAGCGCAC GCGGGTGCGG GTGTTCGAGC CGTTCTACAC CACCAAGCCG 
CCGGGCGAAG GCACGGGGCT GGGCCTTTCG GTGTCGTACT TCATCATCAG CCGCAACCAT 
GGCGGGCACA TCATGGTGGA ATCGCAGCCG GGGCAGTGGT GCCGCTTCAC GGTGCTGCTG 
CCCGCCCTAC GGCGTGCGGC GTAA 

 

Protein sequence

MPKRSDDLRA KLIGLGQAST RKSYYPELKE RLQQLELFRA LLESAGDGVL LLAAETLLVL 
DANGAACRFA GLPWEALTGR PLATAFPELA GWKPHLAGNA EGFVPQDGPR TGGWHMADAA 
PPAGGEERRL IRQPSHGADL WLELALKRHD IGGMQYVSCI ARDVSERLRA EEELRESERK 
YRALFEAAND AIFLIRDGLV RDANRRACEL FGRSLDQLTS MAPRDLSPPE QPRSGATHLA 
EDIHLAKAQA GEPQFFEWTH LRADGTPFDC EISLSRFTLR GEPWLIAIIR DVTEQKKLRE 
IMVQTEKMMS VGGVAAGMAH EINNPLSAIA QSAQNLQRRL TPGVPDNEAA ALISGVDLER 
VQHYFELRGL AKLVSNIREA CARAADIVRH MLDFARRSDA ERAACDLAVL LDRAVELAEN 
DYNLKKRHDF RNIRIVRDYA PGAPMAECAP TEIEQVLFNL LKNASQAISQ KAYPQGEAPC 
ITLRVGTRCG APGLPGGLSG LGSADGVMGM GETEDPGEPE AADAAPANTE YVCVQVEDNG 
PGMDERTRVR VFEPFYTTKP PGEGTGLGLS VSYFIISRNH GGHIMVESQP GQWCRFTVLL 
PALRRAA