| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0976 |
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| Symbol | |
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| ID | 7172870 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1182458 |
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| End bp | 1184452 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539481 |
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| Product | transketolase |
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| Protein accession | YP_002435399 |
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| Protein GI | 218886078 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.166447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTCTC GCAAGGAACT CGCCAACGCC ATCCGCGTGC TCAGCATGGA CGCCGTGGAA
AAGGCCAAGT CCGGGCACCC CGGTGCGCCC ATGGGCATGG CGGACATCGC CGAAGTGCTC
TGGAACGATA GCCTGAAGCA CAACCCCGCC AACCCCAAAT GGGCCGACCG CGACCGCTTC
GTGCTTTCCA ACGGGCACGG CTCCATGCTC ATTTACGCGC TGCTGCATCT TTCCGGCTAC
GATGTCAGCA TGGACGACAT CCGCAACTTT CGCCAACTGC ATTCCAAGAC CCCCGGCCAC
CCCGAATACG GCATCACCCC CGGCGTGGAG ACCACCACCG GCCCGCTGGG GCAGGGCATC
GCCACCGCCG TGGGCATGGC CATGGCCGAA AGGCTCATGG CCCAGCAGTT CAACCGTCCC
GGCTACGACG TGGTGGACCA TGCCACGTAC GTGTTCCTGG GCGACGGCTG CATGATGGAA
GGCATCTCGC ACGAGGCGTG CTCGCTGGCG GGCACCCTGG GCCTCGGCAA GCTGACCGCC
TTTTATGATG ACAACGGCAT CTCCATCGAC GGCGACATCG CCGGGTGGTT CGCTGACGAT
ACCCCGGCCC GCTTCGAGGC TTACGGCTGG CACGTGGTGC GCAACGTGGA CGGCCACGAC
GGCGAAGCCA TCGCCGCCGC GCTCAAGGCC GCCCGTGCGG TGCCCGGCAA GCCCAGCCTG
ATCTGCTGCA AGACCCGCAT CGGCCAGGGC GCGCCCACCA AGGCGGGCAG CCACAACTGC
CACGGCTCGC CTCTGGGCGC CGCCGAAATC GCCGCCGCGC GCGAAGGCAT GAACTGGCCG
CATCCGCCCT TCGAGATTCC GGCGGACATC TACGCCGGGT GGGACGCCCG CCCGCGCGGC
ACCGCCGCCG AGACCGCCTG GAACGATCTG TTCGCCCGCT ACCGTGCCGC CCATCCCGAA
CTGGCCGCCG AGTTCGAACG CCGCATGGCG GGCGACCTGC CCGCCGACTG GCAGGCTGGC
GTGGCCGCCG CGCTTGCCGC CACCGATGGG GCCAGGGAAA CCCTGGCCAC CCGCATCGCC
TCGCGCAACG CCCTGAACGC CGTGGCCCCG CTGCTGCCCG AAATGATCGG CGGCTCGGCG
GACCTTACCG GCTCCGTGGG CACCTGGCAC AAGAATTCCA AGCTGGTCAC CCCCGGTGAC
TGGTCCGGCA ACTACATTTC CTACGGCGTG CGCGAATTCG CCATGGGCGC CATCATGAAC
GGCATGGCCC TGCACGGCGG GTTCCTGCCC TACGCGGGCA CCTTCCTGAT TTTCTCGGAC
TACGCCAAGA ACGCCATCCG CCTGTCCGCC CTCATGGGCG CGCGGGTGGT CTGGGTGCTC
ACGCACGATT CCATCGGCGT GGGCGAAGAC GGCCCCACCC ACCAGCCGGT GGAACAACTG
GCCGGTCTGC GCCTGACCCC CAACGTGCAG GTGTGGCGCC CCTGCGACAC CGTGGAAACC
CTGTCCGCGT GGAAGGCCGC CGCCGAATGC GCCACCGGCC CCACCTGCAT CTCGCTGACC
CGGCAGGACG TGCCCTTTGT GGAACGCACC GCCGAGCAGC GCGCCAACAT CATGCGCGGC
GGCTACGTGC TGCGCGACTG CGCGGGCACG CCGGAATCCA TCATCATGGC CACGGGCTCG
GAAGTGCAAC TGGCCCTTGC CGCCGCAGAT GCACTGGCCG CAAAGGGCCG CAAGGTGCGC
GTGGTGTCCA TGCCGTCGTC CACCCAGTTC GACCGCCAGG ACGCCGCGTA CCGCGAATCG
GTGCTGCCGT CCGCCGTGCG CGCGCGCGTG GCCGTGGAAG CCGCCACCGT GGACGGCTGG
TGGAAGTACC TGGGCCTGGA CGGCAAGGCC GTGGGCATGA CCGGCTTTGG CGAATCCGCC
CCGGGCAAGG TGCTGTTCGA GTACTTCGGC ATTACCACCG AGAAGGTCAT TGAAGCGGTG
GAGTCTCTTA TCTAA
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| Protein sequence | MPSRKELANA IRVLSMDAVE KAKSGHPGAP MGMADIAEVL WNDSLKHNPA NPKWADRDRF
VLSNGHGSML IYALLHLSGY DVSMDDIRNF RQLHSKTPGH PEYGITPGVE TTTGPLGQGI
ATAVGMAMAE RLMAQQFNRP GYDVVDHATY VFLGDGCMME GISHEACSLA GTLGLGKLTA
FYDDNGISID GDIAGWFADD TPARFEAYGW HVVRNVDGHD GEAIAAALKA ARAVPGKPSL
ICCKTRIGQG APTKAGSHNC HGSPLGAAEI AAAREGMNWP HPPFEIPADI YAGWDARPRG
TAAETAWNDL FARYRAAHPE LAAEFERRMA GDLPADWQAG VAAALAATDG ARETLATRIA
SRNALNAVAP LLPEMIGGSA DLTGSVGTWH KNSKLVTPGD WSGNYISYGV REFAMGAIMN
GMALHGGFLP YAGTFLIFSD YAKNAIRLSA LMGARVVWVL THDSIGVGED GPTHQPVEQL
AGLRLTPNVQ VWRPCDTVET LSAWKAAAEC ATGPTCISLT RQDVPFVERT AEQRANIMRG
GYVLRDCAGT PESIIMATGS EVQLALAAAD ALAAKGRKVR VVSMPSSTQF DRQDAAYRES
VLPSAVRARV AVEAATVDGW WKYLGLDGKA VGMTGFGESA PGKVLFEYFG ITTEKVIEAV
ESLI
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