Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0975 |
Symbol | pgk |
ID | 7172869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1180904 |
End bp | 1182085 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643539480 |
Product | phosphoglycerate kinase |
Protein accession | YP_002435398 |
Protein GI | 218886077 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 68 |
Fosmid unclonability p-value | 0.182019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAC TGAAGATGAC CGACCTTGAT CTGAAGGGTA AGCGCGTCCT CCTGCGCGAA GACCTCAACG TGCCCCTGAA GGACGGCAAG GTGACCAGCG ACAAGCGCAT CCGCGCCGCG CTGCCGTCCA TCGAAATGGC CCTCAAGGCG GGTGCCCGCG TGCTGCTGGT GTCGCACCTG GGCCGCCCCA CGGAAGGGGA GTTCGATCCC GCATTTTCGC TGGCTCCGGT GGCCGAGCAT CTTTCCAGGG CGCTGGGCTT TCAGGTGCCC CTGGTGCGCG ACTACATCGA CGGTATCGAG GTGGCGGAAG GCCAGTGCGT GCTGTGCGAG AACGTGCGCT TCCTGAAGGG CGAAAAGAAG GATGACGAGG CCCTGGGGCG CAAGCTGGCC GCCCTGTGCG ACATCTTCGT CATGGACGCC TTCGGGGCGG CGCACCGTGC CCAGGCCTCC ACCCATGCCG CCGTGCGCTT CGCCAAGGTG GCCTGCGCCG GGCCCCTGCT GGCGGCGGAA CTGGACGCCC TGTCCCGCGC CCTGGACGCC CCGGCCAAGC CCATGGTGGG CATCATCGGC GGCTCCAAGG TGTCCACCAA GCTGACCCTG CTGGATACCC TGTCCAAGAA GGTGGACCGG CTCATCGTGG GCGGCGGCAT CGCCAACAAT TTCATCAAGG CCGCCGGGCA TGAGGTGGGC CGTTCGCTGT ACGAGCCGGA ACTGGTGGAC GAGGCCGCCC GTCTGATGGC CGCCGCCAGG GCTGCCGGGG GCGAGATTCC CGTGCCTGTG GACGTGGTGG TGGGGCCGGA ATTCGCGGAT TCCGCCCCGG CCACGGTGCG CAAGGTGTCG GAAGTGAAGC CGGACGAGAT GATTCTGGAC ATCGGCCCCG AAACGGCAAA ACTGTACCGT GACATCCTGA TGCAGGCGGG CACCATCGTC TGGAACGGCC CGGTGGGCGC CTTCGAGGTG GAGCAGTTCG GCCAGGGCAC CAAGGCCCTG TGCATGGCCG TGGCCGACAG CCCGGCCTTC TCGCTGGCGG GTGGCGGCGA CACCGTGGCC GCCATCGAAA AGTACGGCGT GGTGGACCGT ATTTCGTACA TGTCCACCGG CGGCGGGGCC TTCCTGGAGT TTCTGGAGGG CAAGACCCTG CCTGCCGTGG CCGTGCTTGA GGAACGTTCC AGCAAGGGCT AG
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Protein sequence | MAVLKMTDLD LKGKRVLLRE DLNVPLKDGK VTSDKRIRAA LPSIEMALKA GARVLLVSHL GRPTEGEFDP AFSLAPVAEH LSRALGFQVP LVRDYIDGIE VAEGQCVLCE NVRFLKGEKK DDEALGRKLA ALCDIFVMDA FGAAHRAQAS THAAVRFAKV ACAGPLLAAE LDALSRALDA PAKPMVGIIG GSKVSTKLTL LDTLSKKVDR LIVGGGIANN FIKAAGHEVG RSLYEPELVD EAARLMAAAR AAGGEIPVPV DVVVGPEFAD SAPATVRKVS EVKPDEMILD IGPETAKLYR DILMQAGTIV WNGPVGAFEV EQFGQGTKAL CMAVADSPAF SLAGGGDTVA AIEKYGVVDR ISYMSTGGGA FLEFLEGKTL PAVAVLEERS SKG
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