| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0971 |
|---|
| Symbol | aroK |
|---|
| ID | 7172865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | + |
|---|
| Start bp | 1177685 |
|---|
| End bp | 1178242 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643539476 |
|---|
| Product | shikimate kinase |
|---|
| Protein accession | YP_002435394 |
|---|
| Protein GI | 218886073 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0703] Shikimate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 74 |
|---|
| Fosmid unclonability p-value | 0.488424 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTC CCGATCCGCT TCTCGCCCTT GACCCGGCAC GCATCGCCCC CGACGGGTGC
GTCAGCATCA TCGGCATGGC CGGTGCAGGC AAGACCACCG TGGGTCGCGA ACTGGCCCTT
CAGCTTGGCT GGGCCCACGT GGACACCGAC AACCTCATCG AGGCCACCTA CGGCACCCGG
CTGCAAGCCG TGGCCGATTC CATGGACAAG GAAAGCTTCC TGGATGTGGA GGCGGGCGTC
ATCCGCCGCA TCGGCGCGCG GCGTACCGTG CTGTCCACCG GGGGCAGCGT GGTATACCGC
CACGAAGCCA TGGCTCACCT GGCCGCGCTG GGGCCGCTGG TCTACCTTGA CGTCTCCCTG
CCGCTGATCC TCAAGCGCAT TGCCATGAAC CCGGACCGGG GGCTGGCCAT CGCACCGGGG
CAGACCATTG AAGACCTGTA CAACGAACGC ATCGCGCTGT ACCGCCGCTA TGCCACCTTC
ACCGTGGCCG CCGATGCGCT GTCGCCCGGC GGGTGCGCAA CGCGCATCGT GGCCTGGCTG
ACCGGCGGGG AGGCGTGA
|
|---|
| Protein sequence | MTTPDPLLAL DPARIAPDGC VSIIGMAGAG KTTVGRELAL QLGWAHVDTD NLIEATYGTR
LQAVADSMDK ESFLDVEAGV IRRIGARRTV LSTGGSVVYR HEAMAHLAAL GPLVYLDVSL
PLILKRIAMN PDRGLAIAPG QTIEDLYNER IALYRRYATF TVAADALSPG GCATRIVAWL
TGGEA
|
|---|
| |