| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0960 |
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| Symbol | |
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| ID | 7172854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1164827 |
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| End bp | 1166311 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539465 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_002435383 |
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| Protein GI | 218886062 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.0232608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTA TATCTTTTGA TGGCCTTCTG GCCCGTGTTC GTGAAAACAC GCCGGAAATC
CGCACCGACT CGCGCAAGGT GGGCCGGGGC GACGTGTTCG TGGCCGTGCC CGGCGTTGCC
GCCAACGGCG GCGCGGGCGT TGACGGCGCG GATTTCATTG TGAAGGCATG GGCCGCCGGG
GCCGGAGCGG TGGTCTGCCT GCCCGCCAGG GTGGAGGCAG CCCTTGCCGA TGCCCCCGAG
GGTGCGGTGG TGGCCGCCCA CGACGACCCG CGCGTGGCCA TCGGCCTGCT GGGCCAGGCC
CGCTACGGCA CGGATGCGCT GCCCTTTCCG GTGGTGGCCG TTACCGGCAC CAACGGCAAG
ACCACCATCA CCTACCTGCT GGACCACGTG TTTTCCGCCC TTGGCCGCCG GGCCGGGGTG
CTGGGCACCG TCAGCTACCG CTGGCCGGGC TTTGCCATGG ACGCGCCGCT GACCACGCCC
GACTGCATCG AAACCCACGC CATGCTGGGC CGCATGCGCG ACGCCGGGGT GGACGTGGCG
CTGATGGAGG TTTCGTCGCA CGCGCTGGAC CAGCGCCGGG TGGCGGGCAT CCGCTTTGCC
GGGGCCATCC TGACCAACCT GACGCAGGAC CACCTGGACT ACCACGGCGA CATGGAACAC
TACTATGCCG CCAAGGCCCG CCTGTTCACC GAACTGCCCG ACGCGGACAA GGCCTGCGCC
GTCAATGCCG ACGACGCCTG GGGCCGCCGC CTGCTGGGCG AGGTGCCGCA CGCCATCGGC
TTCGGGCTGG ATGCTGGCAA TGCCGTTTCG GGCCGTCGGT TCCTGCACGG CGAGATGGTG
CGCAACGCCA CCTCGGGCCT CACGCTGCGC ATGACTTATG AAGGGCGGCA GTGGGAGCTT
TCCTCGCACC TTGTGGGCGC GCACAACGCC TCCAATCTGC TGGCGGTGCA GGCGGTTTGC
CTGGGCATGG GCCTTGCGCC GCAGGATTTC GCCAGCCTGG CCGGCTTCAC CGGCGTGCCG
GGACGGCTGG AGCGCATCGT GAACCCGCGG GGGCTGGACA TTTTCGTCGA TTACGCACAT
ACCCCCGACG CGCTCGAAAA CGTGCTGCGC GCGCTGCGCG CAGTGGGCTT TTCGCGCATC
GTCACCGTGT TCGGCTGCGG CGGCAACCGC GACCGCACCA AGCGCCCGCT GATGGGGCAG
GCGGTGGCGC GCCATGCCGA CGTGGCGGTG CTCACGTCCG ACAACCCCCG CCACGAGGAC
CCGGAGGCCA TCATGGCCGA CGTGCTGCCC GGCCTTGCCG GGGCGCGCAA GGTGGTCAGC
GACGCCGACC GGGCCCGGGC CATCGGCAAG GCCCTGGCGC TGTTGCAACC GGGCGACGTG
TTGCTGGTGG CGGGCAAGGG GCACGAAAGT TACCAGCAGA TCGGCGACCG CAAGGTGCCG
TACAGCGACC AGCAGGTCAT TCGGGAGATA CTGGGGTGCA ATTGA
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| Protein sequence | MTRISFDGLL ARVRENTPEI RTDSRKVGRG DVFVAVPGVA ANGGAGVDGA DFIVKAWAAG
AGAVVCLPAR VEAALADAPE GAVVAAHDDP RVAIGLLGQA RYGTDALPFP VVAVTGTNGK
TTITYLLDHV FSALGRRAGV LGTVSYRWPG FAMDAPLTTP DCIETHAMLG RMRDAGVDVA
LMEVSSHALD QRRVAGIRFA GAILTNLTQD HLDYHGDMEH YYAAKARLFT ELPDADKACA
VNADDAWGRR LLGEVPHAIG FGLDAGNAVS GRRFLHGEMV RNATSGLTLR MTYEGRQWEL
SSHLVGAHNA SNLLAVQAVC LGMGLAPQDF ASLAGFTGVP GRLERIVNPR GLDIFVDYAH
TPDALENVLR ALRAVGFSRI VTVFGCGGNR DRTKRPLMGQ AVARHADVAV LTSDNPRHED
PEAIMADVLP GLAGARKVVS DADRARAIGK ALALLQPGDV LLVAGKGHES YQQIGDRKVP
YSDQQVIREI LGCN
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