| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0958 |
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| Symbol | |
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| ID | 7172852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 1162090 |
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| End bp | 1163427 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539463 |
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| Product | UDP-N-acetylmuramoylalanine/D-glutamate ligase |
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| Protein accession | YP_002435381 |
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| Protein GI | 218886060 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 0.205963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGCG ACAAGCACAC GGCGCAAACC ATCGGCAAGG GCGACCTTGT GGTGGTCGTG
GGCGCGGGCC GCTCCGGCAT GGCTGCCGCG CGGCTGCTGC ACCGCATGGG GGCGCGCGTG
CGCCTGCTGG AACGCAACGC CGACGGGGTG CCCGCCGACT TTGTGCGCTG GGCCGCGGAA
GCCGGGGTGG AAATCGCCAC CGGCGACCAT GCGCCGACAC AGTTCGAAGG CGCCCGGGCC
GTGGTGCCCA GCCCCGGCAT GGCCGTGTCA AAGCTGCGCC CGCTGTTGGC GCAGGGGCCG
GACGCTCCGG AAATCATGGC CGAAATGGAG CTTGCCTGGC GGCAGTTGGA CGGCGAGCCG
GTGCTGGCCG TCACCGGAAC CAGCGGCAAG ACCACCACGG TTTCGCTGTG CGCCGCCATG
CTGCGCGCGC AGGGGCTTTC CGTGTTCCTC GGCGGCAACA TCGGCACCCC CCTCAGCGAG
TACGTGTTGT CCGTAGCGCA TGGTGGGGCG GACGGGCAGG GCAGGGCCGA CGTGCTGGTC
ATCGAGATTT CCAGCTTCCA GTTGCAGGCC TGCACCACCT TTCGCCCGCG CGTGGCCATG
CTGCTGAACA TCAGCGAGAA CCACCTCGAT TACCACGCCG ACATGGCGGA ATACATCGAC
GCCAAGTTCC GGCTGTTCCG CTGCATGGAG GAAGGCGACC TGGCCATCTT CGGCCAGGGC
GTGCGCGATC TTGTTGCCGC GCGTGACCTG AAGCCCCGCA CGCTGTTCTT CGACGCGGCG
GCGCGGCGTT TTCCGCGCAC CTGCCTGCTG GGCGGGCACA ACCAGGCCAA CATCGAGGCC
GCGTGGCAGG CCTGCCGCGA GTTCGGCGTG ACGCCGGAGG CGGCGGAAAA GGCCGTGGCG
GACTTCGCCC CCATGGAGCA CCGGCTGGAG GCCGTGGCCG AGCGCAACGG CGTGCTGTGG
GTGAACGATT CCAAGTGCAC CACGGTGGAA GCCCTGCGCG TGGCCCTGCA AGCCTTCGAC
CGGCCCGTGG TGCTGATGGT GGGCGGCAAG TTCAAGGGGG GCGACCTTGC GTCCCTGCTG
CCGCTGCTGT GCGGGCGGGT GCGGGCCGTG GTGGGGTTTG GCGCCAGCCG CGAACATTTC
GAGGGGGCCT GGATGGGACA GGGCGATTTT CCCATGTCCT GGCATCCCGC GCTGGAACCC
GCCGTGGCCG AGGCCGCCGC GCTGGCAAGG CCGGGTGACG CCGTGGTGAT GGCCCCGGCC
ACCTCCAGCT TCGACCTTTT CGCCAACTAC AAGGAGCGCG GCCACGCCTT CCGCCGCGCG
GTGGAGGCCC TGCCATGA
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| Protein sequence | MTCDKHTAQT IGKGDLVVVV GAGRSGMAAA RLLHRMGARV RLLERNADGV PADFVRWAAE
AGVEIATGDH APTQFEGARA VVPSPGMAVS KLRPLLAQGP DAPEIMAEME LAWRQLDGEP
VLAVTGTSGK TTTVSLCAAM LRAQGLSVFL GGNIGTPLSE YVLSVAHGGA DGQGRADVLV
IEISSFQLQA CTTFRPRVAM LLNISENHLD YHADMAEYID AKFRLFRCME EGDLAIFGQG
VRDLVAARDL KPRTLFFDAA ARRFPRTCLL GGHNQANIEA AWQACREFGV TPEAAEKAVA
DFAPMEHRLE AVAERNGVLW VNDSKCTTVE ALRVALQAFD RPVVLMVGGK FKGGDLASLL
PLLCGRVRAV VGFGASREHF EGAWMGQGDF PMSWHPALEP AVAEAAALAR PGDAVVMAPA
TSSFDLFANY KERGHAFRRA VEALP
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