Gene DvMF_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0954 
Symbol 
ID7172848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1157132 
End bp1158052 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content66% 
IMG OID643539459 
ProductUDP-N-acetylenolpyruvoylglucosamine reductase 
Protein accessionYP_002435377 
Protein GI218886056 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0812] UDP-N-acetylmuramate dehydrogenase 
TIGRFAM ID[TIGR00179] UDP-N-acetylenolpyruvoylglucosamine reductase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value0.262287 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGG TTCTCGACGG CCCCGTGCTT GCGCACCGCA CCACGCTCCG CCTTGGCGGC 
AGGGCGCTGG CGGAGGTGCG CGCGGCAGGG CCGCGGGATC TGGACGAGCT GCCCGGTGCG 
CTGGCCCGCC TTGGCGGAGA GCCGCGCATG CTGGGCTGCG GCAGCAACAT CCTTGCCGAT 
GACGGCGAAC TGCCCGTGGT GGTGGTGGCG CTGGACAGCG GCGGCCCCTT CGATGCCGCT 
CCGGAAGTGA CCGGCGAAAC GGAAGACGGT CGCGTGCTGG TGCGCGTGGG TGCGGCGCAA 
CGGCTGCCGC GCCTGGTGTC GCGCCTGTCC GCGTGGGGGC TGTGCGGCAT GGAGGGGCTG 
GCGGGCATAC CCGGCGCCGT GGGCGGCGCG GTGGCCATGA ACGCCGGGTC CTACGGATGC 
GAGTGCGGCG CTGCGCTGCA TGCCGTTTCC GTGTTCTCGC CCGCGCTGGG GCATGTGACG 
CTTGGTCGCG ACAGGTTCCG GTACGGTTAC CGGCATTTCG AGGTGCTGGA CGAGGCAGGC 
GCGCCGCTGG GCGGCTGGTA TCTGGTCACC GCCGCCATCT TCGCACTGTC GCGGTGCGAC 
AGCGCCGTGG TGCATGCCGT CATGCGCGGC AACTACCTGA AGAAGAAGGC GACGCAACCG 
GTACTGTCCC ACAGTGCGGG TTGTGTGTTC CGCAATCCGT CGCCGCTGAA CCCTGCCGGC 
AAGTTGCTGG ACGCGGCAGG GCTTAAGGGG TACCGCATAG GGGATATGGC ATTTTCCACG 
ATGCATGCGA ACTTCATGGT CAATGAAGGG CACGGCATTG CAAAAGATGC TTTCAGTTTA 
TTGCAGTATG CAAAAGTTGC CGTGAGTGAA CGTTTTGGAG TTGACCTTGA ACTTGAAGTG 
AAGGTCTGGT CATGGCGATA G
 
Protein sequence
MLKVLDGPVL AHRTTLRLGG RALAEVRAAG PRDLDELPGA LARLGGEPRM LGCGSNILAD 
DGELPVVVVA LDSGGPFDAA PEVTGETEDG RVLVRVGAAQ RLPRLVSRLS AWGLCGMEGL 
AGIPGAVGGA VAMNAGSYGC ECGAALHAVS VFSPALGHVT LGRDRFRYGY RHFEVLDEAG 
APLGGWYLVT AAIFALSRCD SAVVHAVMRG NYLKKKATQP VLSHSAGCVF RNPSPLNPAG 
KLLDAAGLKG YRIGDMAFST MHANFMVNEG HGIAKDAFSL LQYAKVAVSE RFGVDLELEV 
KVWSWR