Gene DvMF_0906 details

Gene Information

• Locus tag: DvMF_0906
• ID: 7172795
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 1089937
• End bp: 1090380
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643539406
• Product: UspA domain protein
• Protein accession: YP_002435329
• Protein GI: 218886008
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0589] Universal stress protein UspA and related nucleotide-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 55
• Fosmid unclonability p-value: 0.00116915
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAAGGACT TCAAGAAGAT TCTCTGCGCG GTGGACTTTT CCGAGCACAG CAAGGACGTC 
GCCGACTATG CAGCCTCTCT CGCCAAGCTG ACCGGCGGGT CGGTGGTGGT GCTGTACGCC 
GCCCCCTCGC TCAGCCAGTA CGTGGGCTTC CACGTGCCGC CGAACTCCAT CGAGAACTTC 
GTGGGCGAAA TCGTTTCCGG CGCGGAAAAG GCCATGGAAT CGTTCGTGGC CGAAAACTTC 
CCGGGCATCA AGGCCGAGGG CCGCATCGTC ACCGGCTATG CGGCGGAAGA AATCCTGGGC 
ATCGCGGACA AGGAAGGCGC GGACGTGATC ATCATGGGCA CCCATGGCCG CAAGGGTCTG 
GACCGCATCC TGTTCGGCTC CGTGGCGGAA AAGGTGGTCA AGAGCGCCCG TCAGCCGGTG 
CTGACCATCC GTCCTTCGGC GTAG 

 

Protein sequence

MKDFKKILCA VDFSEHSKDV ADYAASLAKL TGGSVVVLYA APSLSQYVGF HVPPNSIENF 
VGEIVSGAEK AMESFVAENF PGIKAEGRIV TGYAAEEILG IADKEGADVI IMGTHGRKGL 
DRILFGSVAE KVVKSARQPV LTIRPSA