| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0904 |
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| Symbol | |
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| ID | 7172793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 1088007 |
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| End bp | 1088822 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 643539404 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_002435327 |
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| Protein GI | 218886006 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.0022796 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCGGAA ACAGGCGAAC CGGGCCGGGA AAGGCCCACC ACAGGACCTC CCCCGTTTCG
GACACGCCCG GCGCGCAAGC GCAGGGCACG GTCCGCTGTT TCGTGGGGCT GCCGCTGCCC
CCGCAATGGC AGGACCGGCT GGCCGCGCTG CGCGACGATC TGCATGCGGC CTGCGCCACC
GCCGATACGA CCGGCCCCGG CATGTGCGAC CCGGCCCCGA TGCTGCTGAC GGCACTGGCC
GACCTGCTGC GCCGCCTGCA CTGGACGCCC CCCGGCAACT GGCACCTGAC CCTGCGCTTT
CTGGGCGCCG TGCCCGCCCC CCGCTGCGAC GAGGTGGCGG ACGCGCTGCG GACCATCAGT
TTTGCCCCCC TGCAACTGGC CGTGGGCAAG GCCGGGGTGT TCCCGGCCAG GGGTGACCCG
CGCGTACTGT GGCTGGGGTT GGCGCAAGGC GCAGCGGAAT GCGCGGCCCT GGCCACGGCG
GTCAACGCGG CGCTGGTGCC GCTGGGGTTT ACGCCGGAGG ACCGCCCCTT TGCTCCGCAC
CTTACCCTGG CCCGGCTGCG CGAGGCCCGG CGCGAAGGCG GGCAGCGCCG TGCCGCCCCG
CCCGGCGGCG AATCGGCCTC CCCGCCTTCC CGGCCCTCTT CCCATGCGGC AACGGACGCG
CGCGATGCCC TGCTGGCGGC CATCAACACC CGCATCAGCC GCGCCGCATC GCCGTGGCCC
GTCTGCACCG TGCGCGAAAT GGTGCTGTGG CGCAGCGATC CTGGCGGTGG CCGCCCGGTG
TACACCCCAC TGGCGGTGCT GCCCTCGCGG GGCTGA
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| Protein sequence | MSGNRRTGPG KAHHRTSPVS DTPGAQAQGT VRCFVGLPLP PQWQDRLAAL RDDLHAACAT
ADTTGPGMCD PAPMLLTALA DLLRRLHWTP PGNWHLTLRF LGAVPAPRCD EVADALRTIS
FAPLQLAVGK AGVFPARGDP RVLWLGLAQG AAECAALATA VNAALVPLGF TPEDRPFAPH
LTLARLREAR REGGQRRAAP PGGESASPPS RPSSHAATDA RDALLAAINT RISRAASPWP
VCTVREMVLW RSDPGGGRPV YTPLAVLPSR G
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