Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0897 |
Symbol | |
ID | 7172786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1080643 |
End bp | 1081545 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643539397 |
Product | apurinic endonuclease Apn1 |
Protein accession | YP_002435320 |
Protein GI | 218885999 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.00175083 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGTGG CCGGGGGACT CTGGCGCGCG GTGGAGCACG CCGTGTCGGT GGGGGCGCAG GCCTTGCAGG TGTTCACCGC CAATCAGCGG CGGTGGGAGG TGCCCTGTCC TTCGGATGGT GACGCCAGGC GCTTTCGTGC CGCCGTGTCC GACTGGGGCG GGGGCTTCGT GGCCTCGCAC GCATCGTACC TGTTCAATCT CGCCTCGCCC GACGAGGGCG CCGGAGCGCG CTCGGTGCGC GGGTTGGCGG CAGAGATCGG GCGGTGCGGC CTGCTGGGCA TTCCGTGGGT GGTACTGCAT CCCGGCGCGC ATCTGGAAGG AGGCGATAGG CAGGCCGTGG AGCACGGCGT CCATCGGGTG GCCGCGCGGC TGGCCGCAGC CTTCGACGCG GCGGGACACC TGCATCCCCA TGCCGACGGC GTGGGCGTGC TGCTGGAAAA CACCGCCGGG CAGGGCACCT GCCTTGGGGG CGATGTGGCG GACCTTGGAC GCATCGTGGA TGCCTGTCCG GCCCGCGAAC GGCTGGGGGT GTGCATCGAC ACGGCCCATG CCTGCGCCGC CGGGTACGAC CTGGCGACGG AGGAGGGTTA CGCGCGGCTG ATGGCGGCGG TGGAGGGCGC GGTGGGGCTT GGGCGGGTGC GCCTGTTCCA CGTCAACGAC AGCGCCACGC CATGCGGCGC GCGCAGCGAC CGGCACGCGC ACATCGGGCT GGGGCACGTG GGGGCCGCCG GGTTTGCCCG GCTGGTGCGC GACCCGCGTT TTGCCGCCCA CCCCATGGTG CTGGAAACGC ACAAGGGCAA GGATATGGCA GAGGACCGCC GCAACCTGCG GGTGCTGCGC CGCCTTGCCG CGGGTGATGA TCCGGGCAAG GCCGCGTGCG ACGTGGAAGG GCTGAAGGAA TAG
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Protein sequence | MSVAGGLWRA VEHAVSVGAQ ALQVFTANQR RWEVPCPSDG DARRFRAAVS DWGGGFVASH ASYLFNLASP DEGAGARSVR GLAAEIGRCG LLGIPWVVLH PGAHLEGGDR QAVEHGVHRV AARLAAAFDA AGHLHPHADG VGVLLENTAG QGTCLGGDVA DLGRIVDACP ARERLGVCID TAHACAAGYD LATEEGYARL MAAVEGAVGL GRVRLFHVND SATPCGARSD RHAHIGLGHV GAAGFARLVR DPRFAAHPMV LETHKGKDMA EDRRNLRVLR RLAAGDDPGK AACDVEGLKE
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