| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0890 |
|---|
| Symbol | |
|---|
| ID | 7172779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 1074423 |
|---|
| End bp | 1074965 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 643539390 |
|---|
| Product | ribonuclease P protein component |
|---|
| Protein accession | YP_002435313 |
|---|
| Protein GI | 218885992 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0594] RNase P protein component |
|---|
| TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.0029715 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATTAGCTCTC TAGTCTTCCC CCGGCACAAC CGGCTTGTCC GCAGGCCCGA CTACCTGGCC
TGCTACGACA AGGGACGCCG TCTCTTTACC AAGCATTTCG TCCTGTTTGT CCTATTCGAC
CTGGACCGCA CGGCCAGCCC GGAAGGGTGG CGCCTGGGGC TGGCCGTTAC CAGGAAGACG
GGGTCGGCTG TGCAGCGCAA TCGCGTGAAG CGGGTGCTGC GCGAGTTTTT CCGGCTCCAC
CGCGCCTTGA TGCCCGGTGA CGTGGACGTC ATCGTGGTGC CCAAGCGCCA CCTCAAGCCC
GAGCGGGTCA CACTCGCCCT CGTCACCCAG GAACTCCTGC CCCTGCTGCC GGAACTTCGC
GCCCACCACG GCGCGGACGA CCGCACCGGC GCCCCCAGGC CGGAGGCAGC CGTGGCGGAT
GGTTCCGGAC CGGTGCCCTC CAGACCCGAA GCGGCCACGC CGCCCACGGC CCCCCCAGGC
ACCGCCCCCA CCGACGAGGT CCGGCCAGAC ACGGCCCGCG AGGCGGAAAC CGGAGCGCAA
TGA
|
|---|
| Protein sequence | MSSLVFPRHN RLVRRPDYLA CYDKGRRLFT KHFVLFVLFD LDRTASPEGW RLGLAVTRKT
GSAVQRNRVK RVLREFFRLH RALMPGDVDV IVVPKRHLKP ERVTLALVTQ ELLPLLPELR
AHHGADDRTG APRPEAAVAD GSGPVPSRPE AATPPTAPPG TAPTDEVRPD TAREAETGAQ
|
|---|
| |