Gene DvMF_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0873 
Symbol 
ID7172762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp1053124 
End bp1053564 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content70% 
IMG OID643539374 
Productnuclease (SNase domain protein) 
Protein accessionYP_002435297 
Protein GI218885976 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value0.485227 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCGCG CCGGGCTTCT GGCCCTGCCA CTGCTGTTTC CGCCGCTGTT GGCGAACACG 
GGCGGTTTTG CCTGCCGGGC CGGGGAAACA TTCGGCGATG CGCGGGCCGT GGTGCTTCGC
GTGCCGGACG GCGACACGCT GGTCGTGGAC ATCCCCGGCT ACCCGCCGGT GGCGGGCCGG
GCCATCAGCG TGCGCATTGC AGGGTGCGAC ACCCCGGAAA AACGCGACCC GCGCCCCGAC
CTGCGCGAAC TGTCGCGTCG TGCTCGCGAA CTGACCCTGC ACATGGCCGC GCCGGGCAGC
ACGGTGACCC TGCGCAACCT GCGCCGCGAC AAGTATTTCC GCCTGCTGGC CGATGTGGAG
GCCGACAGCG GCGACATCGC CTCCGCGCTC ATCGAACGCG GGCTGGCCAA ACCCTACGAG
GGCGGACGCA AGCAATGGTA A
 
Protein sequence
MLRAGLLALP LLFPPLLANT GGFACRAGET FGDARAVVLR VPDGDTLVVD IPGYPPVAGR 
AISVRIAGCD TPEKRDPRPD LRELSRRARE LTLHMAAPGS TVTLRNLRRD KYFRLLADVE
ADSGDIASAL IERGLAKPYE GGRKQW