Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0844 |
Symbol | |
ID | 7172733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 1020483 |
End bp | 1021139 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643539345 |
Product | Sua5/YciO/YrdC/YwlC family protein |
Protein accession | YP_002435268 |
Protein GI | 218885947 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0009] Putative translation factor (SUA5) |
TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 0.021666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACC CAACAACGGA TCGCCTCATG CTCAATCTGG ATGATGCCGC CGCGCTGCTG CGTGCGGGAC GGGTGGTGGT GTTTCCCACC GAGACCTTTT TCGGGGTGGG GTGCCTGGCC ACCCATGCCG GAGCCGTGGA CGAGGTGTAC CGGGTGAAGC GCCGCGCCCA CCGCCTGGCC CTGCCGGTCA TCGTGGGCCA TGTGGACCAG CTGACGCAGG TGGCGGCCCC CATGGGCCAC GTGGCGGAAG GGCTGGCCCG GCGGTTCTGG CCGGGGCCGC TGTCCATCCT GCTGCCCGCA GCGCCCGGCG TGCCCGAGCC GCTTACAGGT GGTACGGGGC GCGTGGCCGT GCGCCTGACC CCGCATCCCG CGGCCCGCGA ATTGTGCCTG CGGGCCGGTG GGCCGCTGGT GGCCAGCAGC GCCAACATCA GCGGACGCCC AGCCGTGACG CGTGCCATGG ACCTTGATCC GGAACTGCTG GCCGAGGTGG CCGGGGTTCT GGACCTGCCC CCCGCACCGC CCGGCGGGTT GCCCTCCACG CTGGTGGAAG TGCTGGATGG CGGCTGTATT GGTGACGGTG CGCCGCGCCT GCGGGTGTTG CGGGCCGGGG CCGTGTCGGT GCAGGCCTTG AGCGATGCCG GGTACGCGCC GGAGTGA
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Protein sequence | MPDPTTDRLM LNLDDAAALL RAGRVVVFPT ETFFGVGCLA THAGAVDEVY RVKRRAHRLA LPVIVGHVDQ LTQVAAPMGH VAEGLARRFW PGPLSILLPA APGVPEPLTG GTGRVAVRLT PHPAARELCL RAGGPLVASS ANISGRPAVT RAMDLDPELL AEVAGVLDLP PAPPGGLPST LVEVLDGGCI GDGAPRLRVL RAGAVSVQAL SDAGYAPE
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