Gene DvMF_0837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0837 
Symbol 
ID7172726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp1011110 
End bp1012198 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content72% 
IMG OID643539338 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_002435261 
Protein GI218885940 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.183156 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGG AACCGTTGCT GATAACCCTT GGCGACGCCA ACGGCCTTGG GCCGGAACTG 
GCGTGCCGCC TGCTGGCTGG CCATCTGCCC GGCCACCTGC CCCCCTGCCT GCCCCCCTGT 
CTGGCAGACC GCGTCTTGCT GCTGCTGGGA GCGGAAGCCT CCCTGCGGGC GCATCTTTCG 
TTCGCGAGGG GCACCCCCTT CTGGACACGG GTGGACGACC CGGCGCGGGT GCTGGCCCCG 
TCTGGCGAGT CAGCCGCCCC CGGCGTGTAC CTGTACGAGC CGCCGGGGCT TGCCGACATC 
CGCGTGCAGG TGGGCCAGGC CACCCCGGAC GGCGGCAGGG CGGCTGGCGT GGCCCTTGCC 
ACGGCCTGCG ACCTGCTGCT GGCCCCTGCG GCTGCCGGCG TGCCCTCTCC CGGCGGCCCG 
CCCCTTCAGC GTGGACCCCG CGGACTGGTC ACCCTGCCGC TGCACAAGGC CATGCTGCAC 
GCCGCCGGCT ATGACGTGCC CGGCCATACC GAATACCTTG CCCGGCGCGC GGGCCTTGGC 
GACGACGAGG TGTGCATGCA CCTTGGCGGC GACGTGCTGC GCGTCAGCCT GGTGACCACC 
CACCCGCCTT TGCGCGATGT GCCCGGCCTG ATCACCCGGC AGCGGGTGCT GCACTGCCTG 
CGCCTGACGG CGGCCCACGC GCGGGCCATC GGGGCTGCTG GTCCCGTGGC GGTGTGCGGG 
CTGAACCCCC ACGCCGGGGA ATCTGGCCGC ATCGGCAGCG AGGAAATCGA GGTCATCGCC 
CCGGCGGTGG CCGACGCGGT GGCCGAGGGG CTGGACGTCA TCGGGCCGCT GCCCGCCGAC 
ACGCTGTTCG TCAAGGCGGC GCGCGGCGCT TACGCCGCCG TGCTGGCCAT GTACCACGAT 
CAGGGGCTGG CCCCCCTGAA GATGTTGCAT TTTTCCGACG CCGTGAACGT GACCTTGGGG 
TTGCCCTTCG TGCGCACCTC GGTGGACCAC GGCACGGGCT TCGACATCGC CGGAACCGGC 
ACGGCGGACA CCGGCAGCTT TGCCGCCGCG CTGCGCCTTG CCTGCACCCT CTGCGACGGA 
AAGGACTGA
 
Protein sequence
MRAEPLLITL GDANGLGPEL ACRLLAGHLP GHLPPCLPPC LADRVLLLLG AEASLRAHLS 
FARGTPFWTR VDDPARVLAP SGESAAPGVY LYEPPGLADI RVQVGQATPD GGRAAGVALA 
TACDLLLAPA AAGVPSPGGP PLQRGPRGLV TLPLHKAMLH AAGYDVPGHT EYLARRAGLG 
DDEVCMHLGG DVLRVSLVTT HPPLRDVPGL ITRQRVLHCL RLTAAHARAI GAAGPVAVCG 
LNPHAGESGR IGSEEIEVIA PAVADAVAEG LDVIGPLPAD TLFVKAARGA YAAVLAMYHD 
QGLAPLKMLH FSDAVNVTLG LPFVRTSVDH GTGFDIAGTG TADTGSFAAA LRLACTLCDG 
KD