Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0824 |
Symbol | |
ID | 7172713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 994692 |
End bp | 996542 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643539325 |
Product | signal transduction histidine kinase, nitrogen specific, NtrB |
Protein accession | YP_002435248 |
Protein GI | 218885927 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 0.125796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATTGA ACCCCGACAT GCCCGACCGC AAGGGCGCGG CATCTCGCCT TTCGCCGTGG CTGGTGGTGG GCATGGCCAT GATTCTGGCG CTGGCCGTGG TGGTCCTTGC GGTGCGCAAC ACCCAGCGTG AACGACGGCA CATGTCACAG AATCTCATGG ACCGGGCGGA AGCGCTGATC TGGGCGCTGG AGGCGGGCAC GCGAATCTGG ATGGGCAAGA GCGGGGGCGG GCAGCATTTG CAGGCCCTGC TGGCGGAAAC CGCCATGCAG CCGGGCATCG CCTACATGGC GGTGGTGGAC GGGCGCGGCG TCATCATCGC CCACAGCAAC AGGGACAGAA TAGGGCAACC CCTGCACGCG GCGGAGGACG GCGGCATTCC GGCAACCACG CAGGAGAGGC AGTGGCGCAC CATTGAAACC CCTTCCGGCA AGGTTTTCGA GGTGTACAAG GTGTTCTCGC CGTCCCTGCC GCTGCTGCAT GATGCCGGGC ACGCCCCCGG CTCCAGTTGC ACGGACGGTG GCGGGTCTTC TCCGCCAACC TCTTCGGGAT ATGGTGAAAG TGGGGCGGAA CGGCACGACA TCTTCGTGGG GCTTGCCGTG GCGCCGTTCG AGGAGGCGCT GACGGAAGAC CTGCGCAATG CGGCCATGTT CGCCCTGCTG GTGGTCACGC TTGGCTTCGG GGGGTTCATC TCGCTGTTCT GGGCACAGAA CTACCGGCTG TCGCGCAGGC TGCTGCGGGA TACGCGGGCG TTCGCGGCGG AGGTGGTCAC CCAGCTGCCC GTGGGTCTGC TGGTCACTGA CGGGGATGGC GCCATCACCA TGGCCAACGC CTCGGTGGCG GCCATGCTGA GGCAGAAGCA GGAGCGGCTG GAAGGTTCCC CCCTGGGCGG CAGGTGGGGC GTGGACTGGC GTGGGGCCTG CGACGACCTT GCCGCGGGAA AACCCGTCAT GGAGCGGGAA TGCGAACTGG TGGCGGAGGA CGGAAGGGTG GTCCCCGCAA GTCTCAGCGC CTCGCGCATC GTCAACGAGG ACGGCGAATT CCTGGGCCAC CTGTTCATCC TGCGCAACCT GGAGGAAGTG AAGCGCCTGC AAGACCAGTT GCGGCGCAAC GAGCGGCTGT CCGCGCTGGG CAACCTGGCT GCGGGCGTGG CCCACGAGAT CCGCAACCCC CTCAGTTCCA TCAAGGGCTT CGCCACCTAT CTCGCGGGGC GGCTTCAGGA CGACGGCAAG GGCAGGGATG CGGCCCGGCT CGTCGTGCAG GAGGTGGACC GGCTGAACCG CGTGGTCTCC GAACTGCTGG AGTTCGCCCG TCCCGGCGTG CCGGACCTGC GTGAGGTGCA CGTGGACACG GTCATCGAGC GGTCCGTGCG ACTGGCCGCA ACCGATGCGG CGGCACGGGG CGTGGATCTG CGCTGCGTGC CGGGCTCCGC GCTGCCTCCG GCCTTCCTGG ATGCGGAACG GTTCACCCAG GCCCTGCTGA ACCTGTTGCT GAACGCGGTG GAAGCCACGC CGCCGGGCGG AAGCGTGGAG GTGCGCGCCG CCGTCCGGTC GGAAAAAGGG CCGGAAAAAG GACCGGAAAA AGGGGCGGAG AGGGGGCCGG GCGGCAAGCC GGATGCAGGG CCCCGCGCAT GGCTGGACGT TCAGGTGGCC GACACCGGGC GGGGCATGTC GCCAGATGTG CTGAAGGAGA TATTCAACCC CTATTTCACC ACCAAGCCCT CCGGAACGGG ATTGGGGCTG GCCATCGTGC ACGGGGTGGT GGAAGCGCAC GGCGGGTCCA TAAAGGTGGA GAGCCAGCCG GAGAGGGGAA CCACCGTGAC CATATCGCTG CCGCTGCGGC GGCCCGCATG A
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Protein sequence | MVLNPDMPDR KGAASRLSPW LVVGMAMILA LAVVVLAVRN TQRERRHMSQ NLMDRAEALI WALEAGTRIW MGKSGGGQHL QALLAETAMQ PGIAYMAVVD GRGVIIAHSN RDRIGQPLHA AEDGGIPATT QERQWRTIET PSGKVFEVYK VFSPSLPLLH DAGHAPGSSC TDGGGSSPPT SSGYGESGAE RHDIFVGLAV APFEEALTED LRNAAMFALL VVTLGFGGFI SLFWAQNYRL SRRLLRDTRA FAAEVVTQLP VGLLVTDGDG AITMANASVA AMLRQKQERL EGSPLGGRWG VDWRGACDDL AAGKPVMERE CELVAEDGRV VPASLSASRI VNEDGEFLGH LFILRNLEEV KRLQDQLRRN ERLSALGNLA AGVAHEIRNP LSSIKGFATY LAGRLQDDGK GRDAARLVVQ EVDRLNRVVS ELLEFARPGV PDLREVHVDT VIERSVRLAA TDAAARGVDL RCVPGSALPP AFLDAERFTQ ALLNLLLNAV EATPPGGSVE VRAAVRSEKG PEKGPEKGAE RGPGGKPDAG PRAWLDVQVA DTGRGMSPDV LKEIFNPYFT TKPSGTGLGL AIVHGVVEAH GGSIKVESQP ERGTTVTISL PLRRPA
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