| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0824 |
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| Symbol | |
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| ID | 7172713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 994692 |
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| End bp | 996542 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643539325 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002435248 |
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| Protein GI | 218885927 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.125796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTGA ACCCCGACAT GCCCGACCGC AAGGGCGCGG CATCTCGCCT TTCGCCGTGG
CTGGTGGTGG GCATGGCCAT GATTCTGGCG CTGGCCGTGG TGGTCCTTGC GGTGCGCAAC
ACCCAGCGTG AACGACGGCA CATGTCACAG AATCTCATGG ACCGGGCGGA AGCGCTGATC
TGGGCGCTGG AGGCGGGCAC GCGAATCTGG ATGGGCAAGA GCGGGGGCGG GCAGCATTTG
CAGGCCCTGC TGGCGGAAAC CGCCATGCAG CCGGGCATCG CCTACATGGC GGTGGTGGAC
GGGCGCGGCG TCATCATCGC CCACAGCAAC AGGGACAGAA TAGGGCAACC CCTGCACGCG
GCGGAGGACG GCGGCATTCC GGCAACCACG CAGGAGAGGC AGTGGCGCAC CATTGAAACC
CCTTCCGGCA AGGTTTTCGA GGTGTACAAG GTGTTCTCGC CGTCCCTGCC GCTGCTGCAT
GATGCCGGGC ACGCCCCCGG CTCCAGTTGC ACGGACGGTG GCGGGTCTTC TCCGCCAACC
TCTTCGGGAT ATGGTGAAAG TGGGGCGGAA CGGCACGACA TCTTCGTGGG GCTTGCCGTG
GCGCCGTTCG AGGAGGCGCT GACGGAAGAC CTGCGCAATG CGGCCATGTT CGCCCTGCTG
GTGGTCACGC TTGGCTTCGG GGGGTTCATC TCGCTGTTCT GGGCACAGAA CTACCGGCTG
TCGCGCAGGC TGCTGCGGGA TACGCGGGCG TTCGCGGCGG AGGTGGTCAC CCAGCTGCCC
GTGGGTCTGC TGGTCACTGA CGGGGATGGC GCCATCACCA TGGCCAACGC CTCGGTGGCG
GCCATGCTGA GGCAGAAGCA GGAGCGGCTG GAAGGTTCCC CCCTGGGCGG CAGGTGGGGC
GTGGACTGGC GTGGGGCCTG CGACGACCTT GCCGCGGGAA AACCCGTCAT GGAGCGGGAA
TGCGAACTGG TGGCGGAGGA CGGAAGGGTG GTCCCCGCAA GTCTCAGCGC CTCGCGCATC
GTCAACGAGG ACGGCGAATT CCTGGGCCAC CTGTTCATCC TGCGCAACCT GGAGGAAGTG
AAGCGCCTGC AAGACCAGTT GCGGCGCAAC GAGCGGCTGT CCGCGCTGGG CAACCTGGCT
GCGGGCGTGG CCCACGAGAT CCGCAACCCC CTCAGTTCCA TCAAGGGCTT CGCCACCTAT
CTCGCGGGGC GGCTTCAGGA CGACGGCAAG GGCAGGGATG CGGCCCGGCT CGTCGTGCAG
GAGGTGGACC GGCTGAACCG CGTGGTCTCC GAACTGCTGG AGTTCGCCCG TCCCGGCGTG
CCGGACCTGC GTGAGGTGCA CGTGGACACG GTCATCGAGC GGTCCGTGCG ACTGGCCGCA
ACCGATGCGG CGGCACGGGG CGTGGATCTG CGCTGCGTGC CGGGCTCCGC GCTGCCTCCG
GCCTTCCTGG ATGCGGAACG GTTCACCCAG GCCCTGCTGA ACCTGTTGCT GAACGCGGTG
GAAGCCACGC CGCCGGGCGG AAGCGTGGAG GTGCGCGCCG CCGTCCGGTC GGAAAAAGGG
CCGGAAAAAG GACCGGAAAA AGGGGCGGAG AGGGGGCCGG GCGGCAAGCC GGATGCAGGG
CCCCGCGCAT GGCTGGACGT TCAGGTGGCC GACACCGGGC GGGGCATGTC GCCAGATGTG
CTGAAGGAGA TATTCAACCC CTATTTCACC ACCAAGCCCT CCGGAACGGG ATTGGGGCTG
GCCATCGTGC ACGGGGTGGT GGAAGCGCAC GGCGGGTCCA TAAAGGTGGA GAGCCAGCCG
GAGAGGGGAA CCACCGTGAC CATATCGCTG CCGCTGCGGC GGCCCGCATG A
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| Protein sequence | MVLNPDMPDR KGAASRLSPW LVVGMAMILA LAVVVLAVRN TQRERRHMSQ NLMDRAEALI
WALEAGTRIW MGKSGGGQHL QALLAETAMQ PGIAYMAVVD GRGVIIAHSN RDRIGQPLHA
AEDGGIPATT QERQWRTIET PSGKVFEVYK VFSPSLPLLH DAGHAPGSSC TDGGGSSPPT
SSGYGESGAE RHDIFVGLAV APFEEALTED LRNAAMFALL VVTLGFGGFI SLFWAQNYRL
SRRLLRDTRA FAAEVVTQLP VGLLVTDGDG AITMANASVA AMLRQKQERL EGSPLGGRWG
VDWRGACDDL AAGKPVMERE CELVAEDGRV VPASLSASRI VNEDGEFLGH LFILRNLEEV
KRLQDQLRRN ERLSALGNLA AGVAHEIRNP LSSIKGFATY LAGRLQDDGK GRDAARLVVQ
EVDRLNRVVS ELLEFARPGV PDLREVHVDT VIERSVRLAA TDAAARGVDL RCVPGSALPP
AFLDAERFTQ ALLNLLLNAV EATPPGGSVE VRAAVRSEKG PEKGPEKGAE RGPGGKPDAG
PRAWLDVQVA DTGRGMSPDV LKEIFNPYFT TKPSGTGLGL AIVHGVVEAH GGSIKVESQP
ERGTTVTISL PLRRPA
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