| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0822 |
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| Symbol | |
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| ID | 7172711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 991207 |
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| End bp | 993045 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643539323 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_002435246 |
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| Protein GI | 218885925 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 0.447819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGCACCG CAGTGCACAA CGACAGGTTG CGCAACGTCG CCATCATCGC CCACGTTGAC
CACGGCAAGA CCACCCTCGT GGACGCCCTG TTTCGCCAGA GCGGCGTGTT TCGCGCCGAC
CAGCAGATGG ACGACCGCGT CATGGACCGC ATGGACCTGG AACGCGAGCG CGGCATCACC
ATTGCCGCCA AGAACTGCGC CGTGTCGTGG CAGGGCGTGA AGATCAACAT CATCGACACC
CCCGGCCACG CCGACTTCGG CGGCGAGGTG GAGCGTGCCC TGTCCATGGC CAGCGGCGCC
ATCCTGCTGG TGGACGCCTC GGAAGGCCCC CTGCCCCAGA CCCGCTTCGT GCTGCGCAAG
ACGCTGGAAG CAGGCCTGAA GGTGGTCGTG GTGGTCAACA AGATCGACCG CAAGGACGCC
CGCCCGCAGG AAGTGCTGAA CGAAATCTAC GACCTGTTCA TCGACCTGGA CGCCAACGAA
CAGCAGCTGG AATTTCCCGT GCTGTACGCC ATTGGCCGCG AAGGCGTGGC CATGCACGGC
CTTGAGGACG AGCAGGTTGA CCTTTCGCCG CTGTTCGAAA CCATCGTCAA GGAAATGCCC
GGTCCCATGT ACGACCCGGC GGAACCCTTC CAGATGCTGG TGGCCGACCT TGCCTACTCC
GACTACCTAG GCCGCATGGC CGTGGGCCGC GTGTTCCACG GCTCGGTCAA GGCCAAGGAC
AGCCTGGTCT GCATCGACGA GGACGGCAAG GAAAACCCCC TGCGCGTCAC CCGCCTGCAA
GTCTACGAAG GGCTGCAACT GCGCGACGCC GACGAGGCCG ACCCCGGCGA CATCGTGGTG
GTGGCGGGCA TCGAGAACGT GAAGATCGGC GACACCATCT GCACCCGCGA AGCCCCGCGC
GCCCTGCCCC GCATCCGCGT GGACGAGCCC ACCGTGGCCA TGCGCTTCAC CATCAACACC
TCGCCCCTGG CGGGCCGCGA AGGCAAGCTG GTGCAGTCCA GCAAGATTCG CGAACGCCTG
CTGCGCGAAG CGCTGTCCAA CGTGGCCATC CGCGTGGAAG ATTCCGAGGA GCGTGACAGC
TTCATCGTGA AGGGCCGCGG CGAATTCCAG ATGGCCATCC TTATCGAAAC CATGCGCCGT
GAAGGCTTCG AGCTGTGCGT GGGCCGTCCG GAAGTCATCA TGCGCGAGAA GGACGGCGAG
CGCCTGGAGC CCATCGAGCA CCTGTACGTG GACTGCGACG AGGTGTTCAT GGGCGTGGTC
ACCGAAAAGC TGTCCATCCG CAAGGGCCGC ATGACCAACT GCGCCAACAA CGGCACGGGC
CGCGTGCGGC TGGAGTTTTC CGTGCCCTCG CGCGGACTCA TCGGCTACCG CGACGAATTC
CTTACCGACA CCAAGGGCAC CGGCATCATG AACTCGTACC TTGAAGGGTA CGAGCCGTAT
CGCGGCGACT TCCCCACCCG GTTCACCGGT TCGCTGGTGT CCGACCGTTC GGGCAACGCC
GTGGCCTACG CCCTGTTCAA CCTGGAGCCG CGCGGCGAAA TGTTCTGCGT GCCCGGCGAC
CCGGTGTACG AAGGGCTGAT CTGCGGTGAG CACAACCGCG AAAACGACAT CGACGTGAAC
CCCACCAAGG AAAAGAAGCT CACCAACATG CGCGCCTCGG GCAAGGACGA GAACGTCATC
CTTACCCCCG TGCGGCCCAT GACCCTGGAG CGCGCCCTGC ACTTCGTGCG CGAGGACGAA
ATGGTGGAGG TAACCCCCCT GTCCATCCGC CTGCGCAAGA CCATCCTGGC CGCCCAGAAG
CGTTACCAGA TGGAAGCCGC CAAGAAGAAG GGCAAGTAG
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| Protein sequence | MSTAVHNDRL RNVAIIAHVD HGKTTLVDAL FRQSGVFRAD QQMDDRVMDR MDLERERGIT
IAAKNCAVSW QGVKINIIDT PGHADFGGEV ERALSMASGA ILLVDASEGP LPQTRFVLRK
TLEAGLKVVV VVNKIDRKDA RPQEVLNEIY DLFIDLDANE QQLEFPVLYA IGREGVAMHG
LEDEQVDLSP LFETIVKEMP GPMYDPAEPF QMLVADLAYS DYLGRMAVGR VFHGSVKAKD
SLVCIDEDGK ENPLRVTRLQ VYEGLQLRDA DEADPGDIVV VAGIENVKIG DTICTREAPR
ALPRIRVDEP TVAMRFTINT SPLAGREGKL VQSSKIRERL LREALSNVAI RVEDSEERDS
FIVKGRGEFQ MAILIETMRR EGFELCVGRP EVIMREKDGE RLEPIEHLYV DCDEVFMGVV
TEKLSIRKGR MTNCANNGTG RVRLEFSVPS RGLIGYRDEF LTDTKGTGIM NSYLEGYEPY
RGDFPTRFTG SLVSDRSGNA VAYALFNLEP RGEMFCVPGD PVYEGLICGE HNRENDIDVN
PTKEKKLTNM RASGKDENVI LTPVRPMTLE RALHFVREDE MVEVTPLSIR LRKTILAAQK
RYQMEAAKKK GK
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