Gene DvMF_0797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0797 
Symbol 
ID7172686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand- 
Start bp961619 
End bp962272 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID643539298 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_002435221 
Protein GI218885900 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value0.961406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCA TCCTTCCCGG CAGCACGCCG GAAGCCGACA TCTACTGCCT GACCGATGAC 
GGGCTGTCGC GGGGGCGGTC TGCCGTGGAC GTGGTGGACG CCATGCTGCG CGGCGGGGCG 
CGCATCGTGC AGTACCGCGA GAAGGACAAG CACGCCGGCG AGATGCTGCG CGAGTGCCTG 
GAACTGCGCC GCATGACCCG CGAGGCCGGG GCCTGCTTCA TCGTCAACGA CCACGTGGAC 
ATCGCCATGC TGTGCGATGC CGACGGCGTG CACGTGGGGC AGGAGGACCT GCCCGTGCAG 
GCGGTGCGGC AACTGGTGGG GCCGGGGCGC ATCATCGGGC TGTCCACCCA TTCGCCGGAG 
CAGGCCCGTG CCGCCGTGGC AAGCGGGGCG GACTACATCG GCGTGGGGCC CATTTTCGCC 
ACCAGGACCA AGAAGGACGT CTGCGCGCCC GTGGGGTTCG AATACCTGGA CTGGGTGGTG 
GCCAATGGCA CGCTGCCGTT CGTGGCCATT GGCGGCATCA AGCTGCACAA CATCGGGCAG 
GTGGCCGCGC ACGGCGCGCG GTGCTGCGCG CTGGTCTCGG AAATCGTGGG CGCGGACGAT 
GTTGCCGCCC GCTTCGCGGA AGCCCGTGCG GCCATGGGGG CGGCGCCGGG GTAG
 
Protein sequence
MPRILPGSTP EADIYCLTDD GLSRGRSAVD VVDAMLRGGA RIVQYREKDK HAGEMLRECL 
ELRRMTREAG ACFIVNDHVD IAMLCDADGV HVGQEDLPVQ AVRQLVGPGR IIGLSTHSPE 
QARAAVASGA DYIGVGPIFA TRTKKDVCAP VGFEYLDWVV ANGTLPFVAI GGIKLHNIGQ 
VAAHGARCCA LVSEIVGADD VAARFAEARA AMGAAPG