| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0787 |
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| Symbol | |
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| ID | 7172676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 944569 |
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| End bp | 946737 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643539289 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002435212 |
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| Protein GI | 218885891 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 0.239727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA TCCAGGACGT CCTCGACAAG GTGGCGTCGG TCAACAAGAA CGCCGACCTT
GCCCTCATAC AGAAGGCCTA CGTGTACGCG GCCGCCGCGC ACGCTGGCCA GACGCGCCTT
TCGGGCGAGC CGTACCTGTC GCACCCGCTG GCGGTGGCCT ATTCGCTGGC CGAAATGCGT
TTTGACGAGG CGGCCATAGC CGCCGGGCTG CTGCACGACA CGGTGGAAGA CACCACCGTG
AGCATCGAGG ACATCGACAC CCTGTTCGGC GAAGAAGTGG CCGACGTGGT GGATGGCGTC
ACCAAGATCA GCCAGATGAC CTTCGAGAGC AAGGAAGAGG CCCAGGCCGA GAACATCCGC
AAGATGATCC TGGCCATGGC GCACGACATC AGGGTGCTCA TCGTCAAGCT GGCCGACCGC
CTGCACAACA TGCGCACCCT GGGCTTCCAG AAGTCGCACA AGCAGAAGCT GATCGCCCAG
GAAACCATGG ACATCTACGC CCCGCTGGCC AACCGGCTGG GGCTGCACCG CATCAAGCTG
GAACTCGAGG ACCTGAGCTT CCGCTACCTG AAGCCCGACG TCTACGCCCA GATCGACGAA
TGGCTGGACA CCAACCAGGT GGTGGAACGC CACTACATCG AACGGGTCAT CACCCGCATC
CGCGAGATAC TGGAGAAGAA CGAGATCAAG GGCGAGGTGC GCGGGCGCAT CAAGCACAAG
TACAGCATCT ACAAGAAGAT GGTGCAGCAG GACCTGACGC TGGACGACAT GCACGACATC
ATCGCCTTCC GGGTGATCGT GGGCGACCTG CGCGACTGCT ACGCCGTGCT CGGCCTGATG
CACGCCCAGT GGAAGCCGGT GCACGGGCGG TTCAAGGACT ACATCTCCAT GCCCAAGGCC
AACGGGTACC GCAGCCTGCA CACCACGGTC ATCGGGCCGG AAGGCGAGCG CATGGAGATC
CAGATACGCA CGGAGGAAAT GCACCGCCTG GCGGAACACG GCGTGGCCTC GCACTGGCTG
TACAAGGAAG GCAGCCGGGT GAACCCGCGC GATCTCGAGC AGTTCACCTG GCTGCACGAG
ATCCTGGACC GCCAGAAGAT GGAGACCGAT TCCAAGGAGT TCATGCAGTC GCTGCGCCTC
GACCTGTTCA AGGACGAGGT GTACGTGTTC ACCCCGCGCG GCGACGTGAA GGAACTGCCC
GAAGGGGCAA CCCCCATAGA TTTCGCCTAC CTGATCCATA CAGAGGTGGG CAACCACTGT
GCCGGGGCCA AGGTCAACGG CAAGCTGGTG CCGCTGGGCA CCGCCCTGAA AAGCGGCGAC
ACCATAGAGG TCATTACCGA CAACAGCCGC CGCCCCAGCC GCGACTGGCT GAAGTTCGTC
AAGACGGCCA AGGCCCGCAG CCGCATCCAG CACTACATCC GCACCGAAGA GCGCGAACGG
TCCATCGCGC TGGGGCGCGA GATGCTGGAA AAGGAAGGGC GGCGCATGGG CATCAACATC
ACCAAGGCCC TGCGCGACGG TGACCTGCTG CCCGTGATCA AGGAACTTTC GCTGGGCAGC
GTGGAAGACC TGCTGTCCAA CGTGGGCTAC GCCCGCTACA CCCCCAAGAA GGTGCTGAAG
CGCCTGCTGC CCAAGGACGA GGAGGCCGCG GCGGAAGAAG CGGCCAAGGC AGCCGAGGCC
AGCGCCGCCA GCGCCGCCAC GCGCGAGGCG AACCGCCGGG CGGACAGCGT GAGCATCAAG
GGGGTGGACG ACATCCTGGT GCGCTTCGCC CGCTGCTGCA ACCCGCTGCC GGGCGACCCC
ATCATCGGCT TCATCAGCCG GGGGCGCGGG GTGACGGTGC ACACCTCCGA CTGTGCCAAC
GTGCAGACCA TGGAGCCGGA ACGGCTCATC TCGGTGTTCT GGGACGGGCA GGAGGACAAG
CCCTACCCGG CGCGCATCCA TCTGGTGTGC CGCAACGAAA AGGGCGTGCT GGCCCAGATT
ACCGCGCTGC TGGCCGAAGA GAACGTCAAC ATCGACTCCG GCAACATGCG CTCCATGGTG
GACGGCAAGT CGGAAGTGGA CTTCACCGTG GAGGTGCGCG ACGTGGCGCA CCTGTACCGG
GCGCTGGACA AGCTGCGCAA GCTGCCCACG GTGGTGGAGG TGCTGCGCTC CACCTCGACC
ATGGAATAA
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| Protein sequence | MIRIQDVLDK VASVNKNADL ALIQKAYVYA AAAHAGQTRL SGEPYLSHPL AVAYSLAEMR
FDEAAIAAGL LHDTVEDTTV SIEDIDTLFG EEVADVVDGV TKISQMTFES KEEAQAENIR
KMILAMAHDI RVLIVKLADR LHNMRTLGFQ KSHKQKLIAQ ETMDIYAPLA NRLGLHRIKL
ELEDLSFRYL KPDVYAQIDE WLDTNQVVER HYIERVITRI REILEKNEIK GEVRGRIKHK
YSIYKKMVQQ DLTLDDMHDI IAFRVIVGDL RDCYAVLGLM HAQWKPVHGR FKDYISMPKA
NGYRSLHTTV IGPEGERMEI QIRTEEMHRL AEHGVASHWL YKEGSRVNPR DLEQFTWLHE
ILDRQKMETD SKEFMQSLRL DLFKDEVYVF TPRGDVKELP EGATPIDFAY LIHTEVGNHC
AGAKVNGKLV PLGTALKSGD TIEVITDNSR RPSRDWLKFV KTAKARSRIQ HYIRTEERER
SIALGREMLE KEGRRMGINI TKALRDGDLL PVIKELSLGS VEDLLSNVGY ARYTPKKVLK
RLLPKDEEAA AEEAAKAAEA SAASAATREA NRRADSVSIK GVDDILVRFA RCCNPLPGDP
IIGFISRGRG VTVHTSDCAN VQTMEPERLI SVFWDGQEDK PYPARIHLVC RNEKGVLAQI
TALLAEENVN IDSGNMRSMV DGKSEVDFTV EVRDVAHLYR ALDKLRKLPT VVEVLRSTST
ME
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