Gene DvMF_0774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0774 
Symbol 
ID7172662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp928063 
End bp931155 
Gene Length3093 bp 
Protein Length1030 aa 
Translation table11 
GC content66% 
IMG OID643539275 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002435199 
Protein GI218885878 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.142014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAGG ATTTCATGGA TCCGGAAATA TTCGCCGATT TCATCGTCGA AGCCAAAGAG 
CACCTCGAGA CCATCGAGCC CAACCTGCTC GAACTCGAGA AGGCGCCGGA CAATCTCGCG
CTGCTGAACG AGATATTCCG CCCCATGCAT TCGCTGAAGG GCGCGTCCGG CTTTCTGGGG
CTGAACCGGA TCAACGGCCT TGCGCACCGT GCCGAAAACA TCATGGACGA GTTGCGCAAG
GGGGACATGA CCGTCACCTC CGAGATCATG GACGTCATTC TCTCGGCCAC CGACGCGCTG
CGCCAGATGG TGGACAACCT TGATACCACC GGCGGAGAGG GCGATGTGGA GACGGAATCC
ATCATCGCCA CCATCGACGC CATCATGGCC GGCGGTGCTC CGCCAGCGGC CCCGCGTCCC
GCGCCCGCCG CGCCCGCACC CGCGCCCGCT CCTGAACCCG CTCCGGCGGC TGAACCCGTT
GTCGCTCCGG CTCCCGCGCC TGCCCCGGCA CCCGCTGCCG AGCCAGAGCC GGTGGCAGCG
GCACCCCGCC CCCAGGCAGA GCGCGAAGTC CCGGCAGATG CCGGATCCGC CGAGTGGATC
GCCACGCTGG AGCCCCTGGA GTCCTATGCC CTCACCGCCT TCGGCGAAGG GCACCTAAAG
GACTTCATCG ACGAGGCCCG CGAGATGGCG GAAAATCTCA GTTCGGGGCT GCTGGAACTG
GAACGCAACC CCACCGAGCA GGGAGAACTG GTCAACGACC TGTTCCGCTT CTTCCACAAC
CTCAAGGGCA ACAGCGGCAT TATTGGTTTT GCCGAACTGA ACAGCCTGAC CCACGAGGCG
GAAACCCTGC TCAACAACGT GCGCCGGGGC GAAATGACCG GCTCGCATGA ACTGGTGGAC
CTGCTGCTGC TGGTGGTGGA CCTGCTGGAA GCGCTTGTGA CGCGCATAGA CCCCGTGTCC
GGCAACGTCA CCCCGTTCGA TATTTCGGTC ATTCTCGAAT GCCTGCGCAA GGCCGTGGCC
GGTGGCGACA TCACCCTGCC CGAAGGCCTC GGCGGTCGCC GCAGCGGTGG ATCCGTGGCG
GAAGCCCCCG CGCCGGAAGC CGGCGCGCCC GGCACGGATG ACGACGCTGA CGCGCCGTCC
CCGCCCGTGG CCCCCGGTTA CGACCCCGAC GACGTGGCCC TGTTCATCAA TACGGTACGC
CAGCAGATGG ACAACGTGGG CGTGGCCCTG AAGACCCTGG CCGTGGACGG CACCCAACGC
GAGTATGTTG ACGCGCTGTA CCGGTGTCTG GTGACCATCC AGAATTCTTC CGGCTACATG
GGGTTGGACG ATATTCGTGT CTACGCCGAG CGCACCGCGG GCCTGGTGGA CCAGGCGCGT
TTTTCGGGCA TGGATTTCAG CCTGATGGTG GACCTGATGG AGCAGGAAAC CTCCATCATC
GGAGACATGC TGGAAAAGCA GATCGCCCGC ATCAGCATGC CCGCGCCCGC CCAGGCCCCC
GAAGCAGCCC CGGCTGCCCC CGAAGCCAAG GCGGCCCCCG CTCCGGCGGC AGAGGCCAAG
GCCGTTGCGG CCCCGCCCGC TGCCAAGACT GACGTCACGA CTGACGCCAG GGCAGCTGCC
TCGGTTGATG CCGAAGACGA GGACGCGGAG GACGACGACG CGGCGGTGGT CACCATTTCC
TCGGTGACCG GAACCCCCGC GCCCGCAGCG GCGGTGAAGC CAGCCGCCCC GGCCCCTGCG
TCCGCCGTGG CCGCCCCTGC CGCTTCGGCC AAGCCTGCGG CACCGGTTGC TCCTGCCAGG
CCCGCCGCTC CGACGGCGCC GTCCGCACCT GCGGCCCCTG CGGGCGGTCA GGGCGCGGCA
GCCGCCGCGC AGGCCCAGCA GGCCGGAGCA GCCAAGGCCT CGTCCACCAT CCGCGTGGAC
CACGAAAAGC TGGACCACCT GATGAACCTC ATCGGCGAAC TGATCATCAA CCGCAACCGC
TACACCATGC TGGCCCGCAG GCTGGAGGAC GACACCAACG TCGTCATCGC CGAAGTGGCC
CAGGACCTGT CCGAAACCAC CTACGCCATG GCGCGCATTT CGGACGACCT GCAAGACACC
ATCATGAAGG TGCGCATGGT GCCGGTGTCC TCGGTGTTCT CGCGTTTCCC GCGCCTGGTG
CGCGACCTGT CGCGCAAGAG CGGCAAGGAA GTGGACCTGA TCCTGGAAGG CGAGGAAACG
GAACTGGACA AGAGCGTCGT GGAAGTCATC GGCGACCCGC TTGTGCACCT CATCCGCAAT
GCCGTGGACC ACGGCGTGGA GTCCGAGGAC GAGCGCGTGG CCAAGGGCAA GAAGGCCAAG
GGCAAGGTGA CCCTGCGCGC CTATCACAAG GGCAACTCCG TCGCCATCGA GATCGAGGAC
GACGGCAAGG GCATCGACCC GGAAAAGATG CGCGAAGTGG CCGTGCGCAA GGGCATCATC
ACCCCCGACG AAGCCAAGGC CATGGACGAC CGCGAAGCCA TGGAACTCAT CTTCGCCCCC
GGGTTCTCCT CGGCAGAGAA GATCACCGAC ATCTCCGGGC GCGGCGTGGG CATGGACGTG
GTGCGCACCA ACATCAAGAA CCTGAAGGGC AGCGTCAGCA TCCATTCGGA AATCGGCAAG
GGCACCCGCT TCACCCTGTC CCTGCCGCTG ACACTGGCCA TCATTGATGC GCTGATGGTC
AACGTGGCGG GCGAGATGTA CGCCATCCCG CTGGACGCCG TGTCCGAAAC CACCAAGATC
GAGGCGCGCC GCCTTACCGA CGTCAAGGGC CGCAAAGCCG TGACCCTGCG CGGCGAAGTG
CTGGGCATCG CCTCGCTGTC CGAACTGCTG GGCCTGCCCA AGGGCGACAA GCAGGACGTG
CTGTCCGTCG TCGTCATCCA CGACAACGAC CGGCGTCTGG GCCTGGTGGT GGACCGCCTG
CTGGAACGGC AGGAAATCGT CATCAAGCCC CTGGGCGCCT ACCTTGGCGA CCTCAAGGGC
ATCTCCGGCG CGACCATCAT GGGCGACGGC AGCGTCATCC TGATCCTGGA TCCGCACGAA
GTGTACATGA TGGCCACTTC AAAGGCCATT TAA
 
Protein sequence
MSQDFMDPEI FADFIVEAKE HLETIEPNLL ELEKAPDNLA LLNEIFRPMH SLKGASGFLG 
LNRINGLAHR AENIMDELRK GDMTVTSEIM DVILSATDAL RQMVDNLDTT GGEGDVETES
IIATIDAIMA GGAPPAAPRP APAAPAPAPA PEPAPAAEPV VAPAPAPAPA PAAEPEPVAA
APRPQAEREV PADAGSAEWI ATLEPLESYA LTAFGEGHLK DFIDEAREMA ENLSSGLLEL
ERNPTEQGEL VNDLFRFFHN LKGNSGIIGF AELNSLTHEA ETLLNNVRRG EMTGSHELVD
LLLLVVDLLE ALVTRIDPVS GNVTPFDISV ILECLRKAVA GGDITLPEGL GGRRSGGSVA
EAPAPEAGAP GTDDDADAPS PPVAPGYDPD DVALFINTVR QQMDNVGVAL KTLAVDGTQR
EYVDALYRCL VTIQNSSGYM GLDDIRVYAE RTAGLVDQAR FSGMDFSLMV DLMEQETSII
GDMLEKQIAR ISMPAPAQAP EAAPAAPEAK AAPAPAAEAK AVAAPPAAKT DVTTDARAAA
SVDAEDEDAE DDDAAVVTIS SVTGTPAPAA AVKPAAPAPA SAVAAPAASA KPAAPVAPAR
PAAPTAPSAP AAPAGGQGAA AAAQAQQAGA AKASSTIRVD HEKLDHLMNL IGELIINRNR
YTMLARRLED DTNVVIAEVA QDLSETTYAM ARISDDLQDT IMKVRMVPVS SVFSRFPRLV
RDLSRKSGKE VDLILEGEET ELDKSVVEVI GDPLVHLIRN AVDHGVESED ERVAKGKKAK
GKVTLRAYHK GNSVAIEIED DGKGIDPEKM REVAVRKGII TPDEAKAMDD REAMELIFAP
GFSSAEKITD ISGRGVGMDV VRTNIKNLKG SVSIHSEIGK GTRFTLSLPL TLAIIDALMV
NVAGEMYAIP LDAVSETTKI EARRLTDVKG RKAVTLRGEV LGIASLSELL GLPKGDKQDV
LSVVVIHDND RRLGLVVDRL LERQEIVIKP LGAYLGDLKG ISGATIMGDG SVILILDPHE
VYMMATSKAI