| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0764 |
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| Symbol | |
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| ID | 7172652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 911777 |
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| End bp | 915262 |
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| Gene Length | 3486 bp |
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| Protein Length | 1161 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643539265 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002435189 |
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| Protein GI | 218885868 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.715309 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACGC CAACACTGAC GCAGATCAAG GCCTCCGCCG GATCGGGAAA GACCTACACC
CTGACCCGGC GCTTCCTGTC GCTGCTGGCG GGCGCGCGCG ACGAGGACGG ACGGGCCTGC
TCCCTGGCCG TGGAAGGCGG GCACTGCTGG CCGGACATCC TGGCGGTGAC CTTCACCAAC
AAAGCCGCGT CGGAGATGAA GGAGCGGGTC ATCCGGCTGC TCAAGGAGCA TGCCCTTGCC
GATCCGGCCC AAGCCCGGAA AGACGGTGGC GACGGGGCGT GGCCCCCGGC CCGCGCGGCC
CGCTGGGTGG ACATCATCCT GCGGCGTTAC GGCGCGCTGA ACATCCGCAC CATCGACAGC
CTGCTGACCA TGCTGGTGCG GCTGGCCGCG CTGGAGCTGT CCCTGCCGCC GGACTTCGAG
CCGTCCTTTT CGCCCGACGA GTATTTCGAG CCGCTGTACG ACCTGATCCT GGACCGCGCC
CGCCGGGGCG ATGCGCAGTT GCGGGATGAC GTGCGCGATG CCTGCCGCCT GTTGCTGTTC
CACACCGATC TCAAGGGCTT CACCGTGGGG GCCGGGCTGC GGGTGCGCCT TTCGCAGCTG
CTGCAACTGC ATCTGGCGGA AGGCGGCATG TCTGGCCCAG ACCCCTTAAA TGCCGGCCCC
GCCCCGTTTG ATGCGGATGC CCCCCGTGGC GGCCTGCCCG ATGTGGATAC CGACGCCCTG
GCCGCCAAGC TGGTCGCCAT TCATGCCGAC ATGCAGGATG CCACGGCCAC CCTGTCGCGC
ATCCTGGCCG AAGAGCAGCT TTCCGCCGCC GCCAACCTGC ACAAGTTTCT GGACAAATGC
GCGGAGAACA GCGCCTTTTC CCCGCTGTCC AAGTCCGCCT ATCTGGAAAA GGGGGGGCTG
GACGACTGCC TGCTCAAGGC GTCCAAAGGC AAGGGCAGTG ACGACGCGCG CGCGGCCTTC
GACGCCTGGC GCGACGCCTG CAACGACTTT GCGGTGCGCG GGCGGCTCAT CCAGCGCGCC
TTGCAGGTGG CCCCGCTGGC CGGTCTGGCC CGCGCCATGG CCACGCACCT GCCCGACTTC
CAGCGGCGCG AAGGCAAGCT GCCCCAGCCG CTCATTCCCC TGCACGCCCG CGACGTGCTT
AACGGCGAGT TCGGCGTGTC CGAGGCCTTC TGCCGCATGG GCACGCGGCT TGCGCACGTC
CTCATCGACG AATTCCAGGA CACCAGCCGC GACCAGTGGG CCGCCATCGA GCCGCTGGCC
GTGGAATGCC TGTCGCGCGG CGGCGGGCTG ACCTGGGTGG GCGACGTGAA GCAGGCCATC
TACGGCTGGC GCGGCGGCGA TTCCGCCCTG TTCGACGACA TCCTGGCATC CCCCGCGCTC
ACCGCCATCG TTCCCGACCC GCAGCGTGAA ACCCTGCCCC GCAACTGGCG CAGCCGCGCG
GCCATCGTGC GGCACAACAA CACCGTGTTC GCGCAACTGG ACGACCCGCT GCGCGCGCGG
GGGGTGCTGT CGGCCATGCT GGGCGACAAG ACGCCCGACC ACGTGCTGGA CGAGGCCGCC
GCATCGGTGG CGCGGGCCTT TGCCGGGGCG GCGCAGGAGG TTCCGGACAG GGATTCTGCC
CAGGGCGGGC TGGTGCGCAT CGTGCCCGTA CACGGCGAGG ACAACGGCGA CCTGCGCGAC
AAGGTGCGCC AGCAGTTGCG CGCGCTGTTC ATGGACGACT TGGCCGCCCG CCGACCGTGG
CGCGACGTGG CCGTGCTGGT GCGCAAGAAC GACGAATCCG CGCAGGTGGC CTCGTGGCTC
ATGGACTGGG GCGTGCCGGT GGTGACCGAG AACAGCCTGC GCCTGGCCGA CCATCCCCTT
GTGACCCAGA CCGTGGCCCT GCTGGCCTTC CTGGACTACC CGCCCAACGC GCTGGCCCTG
TGGGAGGTGC TGACCGGCGT GGAGTTGTTC GGCGGCATCA GCGGGCTTTC CGACCACGCG
CTGCGCGACT GGCTGGCCGA CCGCTGCGCC CGCCCCGCCG ACGATCCGCG CGGCGGCAAG
GGGCTGCTGG CCGATTTTCG GGCCACCTTC CCCGTGGCAT GGGAAACGTG GCTGGCCCCG
TTCTACGCCC GCGCCGGGCT GATGGGCCCC TACGACACGG TGCGCGAAAT CTTCGAACGC
TTCCGCGTGG CGCAGCGCCA CCCGGAGGAC ATCGGCTACG TGCGCCGCTT TCTGGAAGTG
GTGCACAACG CCGAATCGCG CGGCCTCACT TCGCTGGCCA CCTTTCTGGA ATTCTGGGTC
GAAAGCGGCG GCGAGGAAAA GGTGCCCATG CCGGAAGCCA TGGACGCCGT GCGGGTGATG
ACCATGCACA AGTCCAAGGG GCTGGAATTC CCGGTGGTGG TGATTCCCTT CCACCACCAG
CCCGACCGCA CCGACCCGCC GCTGGTGGTG GCGGAGCTGG ACGGACAGCC ACTGCTGGCC
CCGCTGTGCC CGGAAATGGG CGACCGCTAC CACCACGCGC AGGCGGCTGC CGCCGCCGAA
AAGCTGCACC TGCTCTACGT GGGCTGGACG CGGCCCGTGG ATGAACTGCA CGCCTACGTC
ACCTCCACTC CGTTCGCCGA ACGGAGTTCG TCCCTGCTGG CCGGGGTACG CGCCCTGCTG
ACCGGGTGCG CCATCGACAC CGGGCAGGAG TACGTGGCCG GGGTGGTGCC CCCGGCGCGG
GCAACGGACG CGCACGCCGG TTCGGATACC GAGGACACGC GGGAAGCTCC ACGGGACGAA
GCGGCGGCGC AGGCCGCACC GCCCGATGCT CCGCAGGCCG TGCCCGCTCC GTTACCTTCT
CCGGCGCGTG CCCCGGCACC AGGCCCGCTA CCGGGGCACG CGGCAGCACA CGCACCGGAC
CTGCCGTCCC CTGCCGCCCC GTGGCGGCCC ATGCAGTGGC TGCCGCGCCT GAAAATATTC
CGCAACCAGC TGGAGGAATT CACCTTCACC GAGCGGCGGC GCGGCATGCT GGTGCATGCC
TGCCTGGAAC AGCTGCGCCT TACCGGCACT CCGGACCAGG ACGCCGCCCG CGCCGTGGCC
CACGGCATGC GCGCCTTCCC CCTGCCGGTG CCGGACCCGG AGGCCACGGC CAACGAACTC
ACCGCCATGC TGGCATGGCT GGCGGCGTTG CCGCAGGCCG CACACTGGTT CACCCACGGC
GTGCCGGAGC AGTCCATCAT GGACGCGCAG GGCAGCATCC ACCGCACCGA CCTCATGGTG
GACGACGGAG AAACCTGCAC CGTGGTGGAA TGGAAGACGG GCCGTCCATC CGACGACCAT
GTGGCGCAGG TGCGCCGCTA TCTGGGCCTG CTGGCCGAGG CCACCGGACG TGGTCCCGCC
GGTGTGCGCG GCGTGCTGGT GTACCTTGAC GGGCGCACCG TGCGGCCCGT GGCCCTGCGC
ACCGCCGACG CCGCCCCGCA GAACGACGCC CCACAGAACG ACGCCAATGA AGGACACCGC
CCGTGA
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| Protein sequence | MPTPTLTQIK ASAGSGKTYT LTRRFLSLLA GARDEDGRAC SLAVEGGHCW PDILAVTFTN
KAASEMKERV IRLLKEHALA DPAQARKDGG DGAWPPARAA RWVDIILRRY GALNIRTIDS
LLTMLVRLAA LELSLPPDFE PSFSPDEYFE PLYDLILDRA RRGDAQLRDD VRDACRLLLF
HTDLKGFTVG AGLRVRLSQL LQLHLAEGGM SGPDPLNAGP APFDADAPRG GLPDVDTDAL
AAKLVAIHAD MQDATATLSR ILAEEQLSAA ANLHKFLDKC AENSAFSPLS KSAYLEKGGL
DDCLLKASKG KGSDDARAAF DAWRDACNDF AVRGRLIQRA LQVAPLAGLA RAMATHLPDF
QRREGKLPQP LIPLHARDVL NGEFGVSEAF CRMGTRLAHV LIDEFQDTSR DQWAAIEPLA
VECLSRGGGL TWVGDVKQAI YGWRGGDSAL FDDILASPAL TAIVPDPQRE TLPRNWRSRA
AIVRHNNTVF AQLDDPLRAR GVLSAMLGDK TPDHVLDEAA ASVARAFAGA AQEVPDRDSA
QGGLVRIVPV HGEDNGDLRD KVRQQLRALF MDDLAARRPW RDVAVLVRKN DESAQVASWL
MDWGVPVVTE NSLRLADHPL VTQTVALLAF LDYPPNALAL WEVLTGVELF GGISGLSDHA
LRDWLADRCA RPADDPRGGK GLLADFRATF PVAWETWLAP FYARAGLMGP YDTVREIFER
FRVAQRHPED IGYVRRFLEV VHNAESRGLT SLATFLEFWV ESGGEEKVPM PEAMDAVRVM
TMHKSKGLEF PVVVIPFHHQ PDRTDPPLVV AELDGQPLLA PLCPEMGDRY HHAQAAAAAE
KLHLLYVGWT RPVDELHAYV TSTPFAERSS SLLAGVRALL TGCAIDTGQE YVAGVVPPAR
ATDAHAGSDT EDTREAPRDE AAAQAAPPDA PQAVPAPLPS PARAPAPGPL PGHAAAHAPD
LPSPAAPWRP MQWLPRLKIF RNQLEEFTFT ERRRGMLVHA CLEQLRLTGT PDQDAARAVA
HGMRAFPLPV PDPEATANEL TAMLAWLAAL PQAAHWFTHG VPEQSIMDAQ GSIHRTDLMV
DDGETCTVVE WKTGRPSDDH VAQVRRYLGL LAEATGRGPA GVRGVLVYLD GRTVRPVALR
TADAAPQNDA PQNDANEGHR P
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