Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0759 |
Symbol | |
ID | 7172647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 904072 |
End bp | 906045 |
Gene Length | 1974 bp |
Protein Length | 657 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643539260 |
Product | methionyl-tRNA synthetase |
Protein accession | YP_002435184 |
Protein GI | 218885863 |
COG category | [J] Translation, ribosomal structure and biogenesis [R] General function prediction only |
COG ID | [COG0073] EMAP domain [COG0143] Methionyl-tRNA synthetase |
TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase [TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 0.940267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCGCT TCTACATCAC CACCCCCATT TACTACGTCA ACGCCAAGCC GCACCTCGGC CATGCCTACA CCACCATCGT GGCCGATTCG CTGCGCCGCT TCCACCGCCT GCTGGGCAAG GACACCTACT TTCTGACCGG CACCGACGAG CACGGCGACA AGATCGTGCA GGCCGCCGAA AAGGCCGGGT GTTCGCCGCA GGAATTCGTG GACGGCGTGA GCACGCAGTT CCGCGACCTG TGGCCGCATC TGGGCGTGGA GTACGACCAG TTCATCCGCA CCACAGACGC GGAGCACAAG AAGTGCGTGC AGGACGTGTT GCAGAAGGTC TACGACAGCG GCGACATCTA CTTTGGCGAG TACGGCGGCC ACTACTGCTA CGGGTGCGAA CGATTCTACA CCGAGAAGGA ACTGGAAAAC GGCCTGTGCC CGCAGCATCA GGTGAAGCCG GAATACATCA GCGAAAAGAA CTATTTCTTC CGCATGTCCA AGTACCAGGG CTGGCTGCGC CAGTACATCC TGGACAACCC CGACTTCATC CGGCCTGAAC GCTACCGCAG CGAAGTGCTG GGCATTCTGG ACAGCGGCGC GCTGGAAGAC CTGTGCATCT CGCGGCCCAA GTCCCGCCTG ACCTGGGGCA TCGAACTGCC GTTCGACAAG GACTACGTGT GCTACGTGTG GTTCGACGCG CTGATCAACT ACATCTCCGC GCTGGGCTGG CCCGACGACG AGAAGTTCGG TCGCTTCTGG CCCGGCGTGC AGCATCTGGT GGCCAAGGAC ATCCTGAAGC CGCACGCGGT GTTCTGGCCC ACCATGCTGA AGGCGGCGGG GCTTGAACCC TACAACAACC TGAACGTGCA CGGCTACTGG CTGGTGCGCG ACACCAAGAT GTCCAAATCG CTGGGCAACG TGGTTGACCC GCTGTCCATG ATCGACAAGT ACGGCCTGAG CGCCTTCCGC TACTTCCTGC TGCGCGAGAT GCACTTCGGC AGCGACGCCA GCTTCTCGGA AGACGCGCTG GTGGCCCGCC TGAACGCGGA CCTGGCCAAC GACCTCGGCA ACCTGTTCAG CCGCGTGCTG TCCATGACCG CCAAGTACTT CGGCGGCGTG GTGCCCGCGC AGGGCCCGCT GACCGAGGAA GACGAGGCCA TCCGCACCCT TGCGGAAGAA GCCCAGCGCA ATTACGTGCG GCTGTTCGAA CGGGTGCGCT TCTCCAACGC GCTGGAATCG CTGTGGGAAC TGGTGCGCGC CCTGAACCGC TACGTGGACC ATGCCGCGCC GTGGACCCTG TTCAAGCAGG GCGACACCGA GCGCCTGGGC ACCGTCATGT ACGTGATGCT GGAATGCATG CGCAAAGTGG CCGTGCACCT GTGGCCGGTG ATGCCCGAGG CCTCCACCGT GCTGTTGGGG CAGTTGGGCC AGACGCTGGA CCCGGCCACC GTGCAGTTGG CTGACGAGGC CGACCGCTGG GGCGGGCTGG CCGCCGGTAC CACCGTGGCG TCGTCGTCCA ACCTGTTCCC CCGTGTGGAA CTGGAAAAGG TGGAAGAGTC CAAACCCGCC AAGGCGGAAG GCAAGAAAAA GGACAAGGCC GCCGCTTCCG CTCAGGCTGC CGCGCAATCC GCCGCGCCTG CCGCTGGCGA CGAACCCGCC ACCATCGAGT TCACCGACTT CCAGAAGCTG GACATCCGCT TCGGCACCGT GGTGGTTGTG GAACGCCATC CCAACGCCGA CAAACTGCTG CGTGTGGAAG TGGATCTTGG CGAAGCGGCC CCGCGCCAGA TCGTGGCCGG GCTTGCCGAA TACTTTACGC CTGACTTCCT GCTGGGACGC CAGGTGGCCG TGGTGGCCAA CCTTGCCCCG CGCAAGCTGC GCGGTCTGGA ATCACAGGGG ATGATCCTTG CGGTGCGCAC CGAAAGCGGC ATGCAACTGG TGGCCGCGTC CGGCCCGGTG GCCAACGGGG CCAAGGTGTC GTAA
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Protein sequence | MDRFYITTPI YYVNAKPHLG HAYTTIVADS LRRFHRLLGK DTYFLTGTDE HGDKIVQAAE KAGCSPQEFV DGVSTQFRDL WPHLGVEYDQ FIRTTDAEHK KCVQDVLQKV YDSGDIYFGE YGGHYCYGCE RFYTEKELEN GLCPQHQVKP EYISEKNYFF RMSKYQGWLR QYILDNPDFI RPERYRSEVL GILDSGALED LCISRPKSRL TWGIELPFDK DYVCYVWFDA LINYISALGW PDDEKFGRFW PGVQHLVAKD ILKPHAVFWP TMLKAAGLEP YNNLNVHGYW LVRDTKMSKS LGNVVDPLSM IDKYGLSAFR YFLLREMHFG SDASFSEDAL VARLNADLAN DLGNLFSRVL SMTAKYFGGV VPAQGPLTEE DEAIRTLAEE AQRNYVRLFE RVRFSNALES LWELVRALNR YVDHAAPWTL FKQGDTERLG TVMYVMLECM RKVAVHLWPV MPEASTVLLG QLGQTLDPAT VQLADEADRW GGLAAGTTVA SSSNLFPRVE LEKVEESKPA KAEGKKKDKA AASAQAAAQS AAPAAGDEPA TIEFTDFQKL DIRFGTVVVV ERHPNADKLL RVEVDLGEAA PRQIVAGLAE YFTPDFLLGR QVAVVANLAP RKLRGLESQG MILAVRTESG MQLVAASGPV ANGAKVS
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