Gene DvMF_0759 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0759 
Symbol 
ID7172647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp904072 
End bp906045 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content64% 
IMG OID643539260 
Productmethionyl-tRNA synthetase 
Protein accessionYP_002435184 
Protein GI218885863 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones76 
Fosmid unclonability p-value0.940267 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCGCT TCTACATCAC CACCCCCATT TACTACGTCA ACGCCAAGCC GCACCTCGGC 
CATGCCTACA CCACCATCGT GGCCGATTCG CTGCGCCGCT TCCACCGCCT GCTGGGCAAG
GACACCTACT TTCTGACCGG CACCGACGAG CACGGCGACA AGATCGTGCA GGCCGCCGAA
AAGGCCGGGT GTTCGCCGCA GGAATTCGTG GACGGCGTGA GCACGCAGTT CCGCGACCTG
TGGCCGCATC TGGGCGTGGA GTACGACCAG TTCATCCGCA CCACAGACGC GGAGCACAAG
AAGTGCGTGC AGGACGTGTT GCAGAAGGTC TACGACAGCG GCGACATCTA CTTTGGCGAG
TACGGCGGCC ACTACTGCTA CGGGTGCGAA CGATTCTACA CCGAGAAGGA ACTGGAAAAC
GGCCTGTGCC CGCAGCATCA GGTGAAGCCG GAATACATCA GCGAAAAGAA CTATTTCTTC
CGCATGTCCA AGTACCAGGG CTGGCTGCGC CAGTACATCC TGGACAACCC CGACTTCATC
CGGCCTGAAC GCTACCGCAG CGAAGTGCTG GGCATTCTGG ACAGCGGCGC GCTGGAAGAC
CTGTGCATCT CGCGGCCCAA GTCCCGCCTG ACCTGGGGCA TCGAACTGCC GTTCGACAAG
GACTACGTGT GCTACGTGTG GTTCGACGCG CTGATCAACT ACATCTCCGC GCTGGGCTGG
CCCGACGACG AGAAGTTCGG TCGCTTCTGG CCCGGCGTGC AGCATCTGGT GGCCAAGGAC
ATCCTGAAGC CGCACGCGGT GTTCTGGCCC ACCATGCTGA AGGCGGCGGG GCTTGAACCC
TACAACAACC TGAACGTGCA CGGCTACTGG CTGGTGCGCG ACACCAAGAT GTCCAAATCG
CTGGGCAACG TGGTTGACCC GCTGTCCATG ATCGACAAGT ACGGCCTGAG CGCCTTCCGC
TACTTCCTGC TGCGCGAGAT GCACTTCGGC AGCGACGCCA GCTTCTCGGA AGACGCGCTG
GTGGCCCGCC TGAACGCGGA CCTGGCCAAC GACCTCGGCA ACCTGTTCAG CCGCGTGCTG
TCCATGACCG CCAAGTACTT CGGCGGCGTG GTGCCCGCGC AGGGCCCGCT GACCGAGGAA
GACGAGGCCA TCCGCACCCT TGCGGAAGAA GCCCAGCGCA ATTACGTGCG GCTGTTCGAA
CGGGTGCGCT TCTCCAACGC GCTGGAATCG CTGTGGGAAC TGGTGCGCGC CCTGAACCGC
TACGTGGACC ATGCCGCGCC GTGGACCCTG TTCAAGCAGG GCGACACCGA GCGCCTGGGC
ACCGTCATGT ACGTGATGCT GGAATGCATG CGCAAAGTGG CCGTGCACCT GTGGCCGGTG
ATGCCCGAGG CCTCCACCGT GCTGTTGGGG CAGTTGGGCC AGACGCTGGA CCCGGCCACC
GTGCAGTTGG CTGACGAGGC CGACCGCTGG GGCGGGCTGG CCGCCGGTAC CACCGTGGCG
TCGTCGTCCA ACCTGTTCCC CCGTGTGGAA CTGGAAAAGG TGGAAGAGTC CAAACCCGCC
AAGGCGGAAG GCAAGAAAAA GGACAAGGCC GCCGCTTCCG CTCAGGCTGC CGCGCAATCC
GCCGCGCCTG CCGCTGGCGA CGAACCCGCC ACCATCGAGT TCACCGACTT CCAGAAGCTG
GACATCCGCT TCGGCACCGT GGTGGTTGTG GAACGCCATC CCAACGCCGA CAAACTGCTG
CGTGTGGAAG TGGATCTTGG CGAAGCGGCC CCGCGCCAGA TCGTGGCCGG GCTTGCCGAA
TACTTTACGC CTGACTTCCT GCTGGGACGC CAGGTGGCCG TGGTGGCCAA CCTTGCCCCG
CGCAAGCTGC GCGGTCTGGA ATCACAGGGG ATGATCCTTG CGGTGCGCAC CGAAAGCGGC
ATGCAACTGG TGGCCGCGTC CGGCCCGGTG GCCAACGGGG CCAAGGTGTC GTAA
 
Protein sequence
MDRFYITTPI YYVNAKPHLG HAYTTIVADS LRRFHRLLGK DTYFLTGTDE HGDKIVQAAE 
KAGCSPQEFV DGVSTQFRDL WPHLGVEYDQ FIRTTDAEHK KCVQDVLQKV YDSGDIYFGE
YGGHYCYGCE RFYTEKELEN GLCPQHQVKP EYISEKNYFF RMSKYQGWLR QYILDNPDFI
RPERYRSEVL GILDSGALED LCISRPKSRL TWGIELPFDK DYVCYVWFDA LINYISALGW
PDDEKFGRFW PGVQHLVAKD ILKPHAVFWP TMLKAAGLEP YNNLNVHGYW LVRDTKMSKS
LGNVVDPLSM IDKYGLSAFR YFLLREMHFG SDASFSEDAL VARLNADLAN DLGNLFSRVL
SMTAKYFGGV VPAQGPLTEE DEAIRTLAEE AQRNYVRLFE RVRFSNALES LWELVRALNR
YVDHAAPWTL FKQGDTERLG TVMYVMLECM RKVAVHLWPV MPEASTVLLG QLGQTLDPAT
VQLADEADRW GGLAAGTTVA SSSNLFPRVE LEKVEESKPA KAEGKKKDKA AASAQAAAQS
AAPAAGDEPA TIEFTDFQKL DIRFGTVVVV ERHPNADKLL RVEVDLGEAA PRQIVAGLAE
YFTPDFLLGR QVAVVANLAP RKLRGLESQG MILAVRTESG MQLVAASGPV ANGAKVS