| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0646 |
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| Symbol | |
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| ID | 7172533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 776678 |
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| End bp | 779719 |
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| Gene Length | 3042 bp |
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| Protein Length | 1013 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643539146 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_002435071 |
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| Protein GI | 218885750 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 0.166325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTA CGCGGCGGAG TTTTCTCAAG CTCATGAGCG TGAGCGCTGT CGGCCTCTCG
CTCGGCCAGC TTGGGTTCGA TCTTGCTGAA GCGCAGGCGT ATGCCAGCAA GCTCAAGATC
GAAGGCGCAA AGGAAGTGGG CAGCGTCTGC CCCTTCTGTT CCGTCTGTTG TCAGATCATC
GCCTACGTGC GCAACGGCAA GCTCGTTTCG ACCGAAGGCG ACCCCGACTT TCCGGTAAAC
GAAGGGGCGC TGTGCGCCAA GGGCGCGGCC CTCTTCTCCA TGTACACCAA CCCGCATCGC
CTGACGAAGC CGCTGTACCG CGCTCCGCAC AGCGACAAGT GGGTGGAGAA GGACTGGGAC
TGGACCCTGA ACCAGATCGC GCGCCGCGTT AAGGACACCC GCGACAAGGA CATGGTCCTC
AAGAACGAAA AGGGCCAGAC CGTCAACCGC GTGGATTCGC TTTTCATGAT GGGCACCTCG
CACGCCTCCA ACGAGGAATG CGCCGTCATC CATCAAGCCA TACGAAGCCT GGGTATGGTC
CAAATGGACC ACCAGGCCCG GGTCTGACAC AGTCCCACTG TTGCGGCTCT GGCAGAGTCG
TTCGGTCGCG GGGCTATGAC GAACCACTGG ATCGATATCA AGAATAGCGA TGCAGTGCTT
ATTATCGGCA GCAATGCCGC AGAACACCAT CCTGTCGCCT TCAAGTGGGT CATGCGCGCC
AAGGAAAACG GCGCCGTGCT CATGCACGTG GACCCCAAGT TCTCCCGCAC CTCGGCACGC
TGCGATTTCC ACGTGCCCCT GCGTTCGGGC ACGGACATCC CCTTCCTGGG CGGCATGATC
AACTACATCC TTGAAAAGGA ACTCTTTTTC AAGGAGTACG TCTTCAACTA CACCAACTTC
GCCTTTGTCG TCGGCAAGGA CTACGAGTTC AACGACGGCC TCTTCAGCGG GTACGACCCC
AAGACCCGCA AGTACGACCA GTCCAAGTGG GCCTTCGAAA AGGGTCCCGA CGGCGGCCCG
GTCATCGACG AAACCCTCAA GAACGAGCGC TGCGTCTTCA ACCTGATGAA GAAGCACTAC
TCGCGCTACA CGCTGAAGAC CGTCTCCGAC GTCACCGGCG TGTCCGAGGA AAACCTGCTG
CGCGTGTACG ATGCGTTCTG CGCCACCGGC AAGCCGGACA AGGCAGGCAC CATCATGTAC
GCCCTGGGCT GGACCCAGCA CACCGTGGGC GTGCAGAACA TCCGCGCCTC GTCGCTCATC
CAGCTGCTGC TGGGCAACAT CGGCATCGCG GGCGGCGGCA TCAACGCCCT GCGCGGCGAG
CCCAACGTGC AGGGTTCCAC CGACCACGGC CTGCTGTACA GCTCGCTGCC GGGCTATCAC
AACCTGCCCG TGTCCACCTG GCAGACCCTG GCCGACTACA ACAAGGCCAA CACCCCGGTC
ACCACGCTGA AGAACAGCGC CAACTGGTGG AGCAACCGTC CCAAGTACGT GGCCAGCCTG
CTGAAGGGCT GGTACGGCGA CGCGGCCACG CCCGAGAACG ACTTCTGCTA CGAATACCTG
CCGAAGCTCG AACCCGGCGA GGACTGCTCG TACATGTACG TCATGGACAA GATGTACCAT
GGCAAGATCA AGGGCGGGTT CATCTTCGGG GTCAACCCGA TGAACAGCTT CTCCAACACC
AACAAGATGC GCGCGGCGCT GGACAAGCTG GACTGGCTGG TCTGCTCCGA ACTGCACAAC
TCGGAAACCA CGGACAACTG GCAGCGCCCC GGCGTTGATC CCAAGACCAA GAAGACCGAG
GTGTTCCTGC TGCCGTCGGC CCACCGCATC GAAAAGGCGG GCACCATCAG CAACAGCGGT
CGCTGGTTGC AGTGGTTCGA CAAGGCGGTG GAACCGGGCG GACAGGCCCG CAACTTCGCC
GACATCTTCG TGCCGCTGAT CAACAAGATC CGCGACCTGT ACAGGAAGGA AGGCGGCACG
CTGCCCGAGC CCCTGCTGAA GATGCACTGG ACCGAAAAGT TCGAACCGGA AGAATGGACC
CGCCGCATCA ACGGCTTCTT CTGGGCCGAC ACCAAGGTGG GCGACAAGGA ATACAAGCGC
GGCCAGATGG TGCCCGCCTT CGCCCAACTG AAGGACGACG GCTCCACCTC GTCGCTGAAC
TGGATCTACG CAGGCAGCTA CACCGAAGAG GCCGGCAACA AGTCCAAGAA GCGCGACGCC
AGCCAGACGC CCATGCAGGC CAACATCGGC CTGTTCCCCA ACTGGTCGTG GTGCTGGCCG
GTGAACCGAC GCATCCTGTA CAACCGCGCT TCGGTTGACC TGAACGGCAA GCCGTTCAAC
CCCAAGAAGG CCGTCATCGA ATGGGACGGC GCGAAGTGGA TCGGCGACGT GCCCGACGGC
CCGTGGCCCC CCATGGCCGA CAAGGAAAAG GGCAAGCTGC CCTTCATCAT GACCAAGGAC
GGCTATGCCC AGTTCTACGG CACCGGCCGC GTGGACGGTC CCTTCCCCGA GCACTACGAA
CCTGCGGAAA CCCCGCTGGA CAGCCATCCG TTCTCCAAGC AGCTGTCCAG CCCGGTGTAC
AAGTTCCACA CCTCGGACAT GGACCAGTTC GCCAAGGCGG CCGACCCCAA CTACCCGTAC
GTGCTCACCA CCTACAGCCT GACGGAACAC TGGTGCGGCG GCGGCGAAAC GCGCAACGTG
CCCAACCTGC TGGAAACCGA GCCTCAGCTC TACATAGAGA TGAGCCACGA GCTGGCCAAG
GAAAAGGGCA TCAACAACGG CGACGGCGTG ATCGTGGAAA GTGCGCGCGG GCGCGTGGAG
GCCATAGCCA TGGTCACCGT GCGCATCCGG CCCTTCACCA TCATGGGCAA GACGGTGCAC
CTCGTGGGCA TGCCTTTCGC CTACGGCTGG ACCACGCCCA AGTGCGGTGA CTCCACCAAC
CGCCTTACCG TCGGCGCGTA CGACCCGAAC ACCACCATTC CCGAAAGCAA GGCCTGTCTC
GTCAACTTGC GCAAGGCCGA CAAGCTGACC GAAATAGCCT AA
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| Protein sequence | MNTTRRSFLK LMSVSAVGLS LGQLGFDLAE AQAYASKLKI EGAKEVGSVC PFCSVCCQII
AYVRNGKLVS TEGDPDFPVN EGALCAKGAA LFSMYTNPHR LTKPLYRAPH SDKWVEKDWD
WTLNQIARRV KDTRDKDMVL KNEKGQTVNR VDSLFMMGTS HASNEECAVI HQAIRSLGMV
QMDHQARVUH SPTVAALAES FGRGAMTNHW IDIKNSDAVL IIGSNAAEHH PVAFKWVMRA
KENGAVLMHV DPKFSRTSAR CDFHVPLRSG TDIPFLGGMI NYILEKELFF KEYVFNYTNF
AFVVGKDYEF NDGLFSGYDP KTRKYDQSKW AFEKGPDGGP VIDETLKNER CVFNLMKKHY
SRYTLKTVSD VTGVSEENLL RVYDAFCATG KPDKAGTIMY ALGWTQHTVG VQNIRASSLI
QLLLGNIGIA GGGINALRGE PNVQGSTDHG LLYSSLPGYH NLPVSTWQTL ADYNKANTPV
TTLKNSANWW SNRPKYVASL LKGWYGDAAT PENDFCYEYL PKLEPGEDCS YMYVMDKMYH
GKIKGGFIFG VNPMNSFSNT NKMRAALDKL DWLVCSELHN SETTDNWQRP GVDPKTKKTE
VFLLPSAHRI EKAGTISNSG RWLQWFDKAV EPGGQARNFA DIFVPLINKI RDLYRKEGGT
LPEPLLKMHW TEKFEPEEWT RRINGFFWAD TKVGDKEYKR GQMVPAFAQL KDDGSTSSLN
WIYAGSYTEE AGNKSKKRDA SQTPMQANIG LFPNWSWCWP VNRRILYNRA SVDLNGKPFN
PKKAVIEWDG AKWIGDVPDG PWPPMADKEK GKLPFIMTKD GYAQFYGTGR VDGPFPEHYE
PAETPLDSHP FSKQLSSPVY KFHTSDMDQF AKAADPNYPY VLTTYSLTEH WCGGGETRNV
PNLLETEPQL YIEMSHELAK EKGINNGDGV IVESARGRVE AIAMVTVRIR PFTIMGKTVH
LVGMPFAYGW TTPKCGDSTN RLTVGAYDPN TTIPESKACL VNLRKADKLT EIA
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