Gene DvMF_0623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0623 
Symbol 
ID7172510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp745468 
End bp746037 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content67% 
IMG OID643539123 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_002435048 
Protein GI218885727 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.0327265 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTT CCTCCACGGT GCATTACGCA TCCCGGCTGC TGGTCAACCT TGCCCTGCAC 
TGCCCGCAGG ACGGGCCCCT TTCCGCCTCG GAGCTGGCCG AGCACACGGG CATTTCCGTC 
AAGTTCATCG AAAAGATCAT CCGCCAGCTG CGCACGGCGG GCATGGTCCG CAGCGTGCGC 
GGCGCCGCCG GCGGCCACGT GCTGACCATG AACCCCGACG ACGTGACCCT GGGCGACGTG 
CTGCGCGTGG TGGAAGGCGG CGTGCAACCG CCCAACTGCT GCGTGGGCGC TGACTGCGAC 
GACACCCCCT GCCGCTGCAA GGCCGCCTGG ACCAGCGCCG CCAAGGCCCT GGAAGAAACC 
CTGGACCAGT TCACCCTTAC CGACATCATG CACGGCGCCG AACGTCCCGA CGACTGCGCC 
CACATGGCCG GCGAGGCGGA CACCGACGCA CGCCCCGCCC CCAAGGCCAA GCTGAACGGC 
AACAAGCCGC TGAACACGCC GCGATACGGC AGAACGCCCC GTGCCCTGCG GGGCTGCAAT 
ACCCGAATCT GCTCTCACCA AAGCCAATAA
 
Protein sequence
MRISSTVHYA SRLLVNLALH CPQDGPLSAS ELAEHTGISV KFIEKIIRQL RTAGMVRSVR 
GAAGGHVLTM NPDDVTLGDV LRVVEGGVQP PNCCVGADCD DTPCRCKAAW TSAAKALEET 
LDQFTLTDIM HGAERPDDCA HMAGEADTDA RPAPKAKLNG NKPLNTPRYG RTPRALRGCN 
TRICSHQSQ