Gene DvMF_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0593 
Symbol 
ID7172480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp704411 
End bp705748 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content63% 
IMG OID643539093 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002435018 
Protein GI218885697 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.0259071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA CGACAAAATC CGGGAAAGTG CACGCGTCCC CGGCTTCCGC AAGTAATGAG 
CGTCCCGCGC GCGGGAGCAA AGCCGCCAAG GCAGGCACGA AGCAAACCGC GCAAAAGGGT
ACCGGTCCAA AGGGCACGAA GCAGGCGGGC GCAGGCGCGG AGCCGTCCAA GGTCTTTTTC
ACCGACATGC GGTGCAGGAT CGGCACCAGC CTGCTCGACA AGTTGGACAA GCTCATGCTG
GCGGCGGGCA TGGAGCGCAT CAACTTCCAG AACGCCTTCG TGGCCATCAA GATCCATTTC
GGCGAGCCGG GCAACCTCGC CTTCCTGCGC CCCAATTTCG CCAAGACCGT CGCGGACCGG
GTGAAGAAGC TGGGCGGCAT GCCCTTTCTG ACCGATGCCA ACACGCTCTA CGTGGGCCGT
CGCAACAACG CCCTGCTGCA CATGGACGCC GCCTACGAAA ACGGGTTCAC CCCTTTCTCT
ACCGGCTGCC ACGTGGTCAT CGCGGATGGC CTGAAAGGCG CGGACGAGGT GGAGGTGCCC
ATCGAAGGCG GCGTGCACCT GAAAACCGCC AAGATCGGCC GGGCCATCAT GGACGCCGAC
GTCTTCATCT CGCTGAACCA CTTCAAGGGG CACGAGCTGA CAGGCTTCGG CGGGGCCATC
AAGAACATCG GCATGGGCAG CGGCAGCCGG GCTGGCAAGA TGATCATGCA CAACAACGGC
AAGCCCCGCG TTGCCCACGA CAAGTGCGTG GGCTGCCGCA CCTGCGCCAG GTACTGCAAC
CAGGACGCCA TCACCTTCAA CGAAGAACAG AAGGCGTCCA TCAACCACGA ACTGTGCGTA
GGCTGCGGGC GGTGCATAGC CACCTGCAAC TTCGACGCAA TCGACACGCC GTGGTCAGGC
AGCAGCGACG ACGTGAACAT CCGGATGGTG GAATACGCCA AGGCCGTGCT GGACGGGCGC
CCCAACTTCC ACATCAGCGT GGTCAACCAC GTCTCGCCCA ACTGTGACTG CCATGGCGAA
AACGACGCCG CCATCATTCC GGACATCGGC ATCTTCGCCA GCTTCGACCC CGTGGCGCTG
GACAAGGCCT GCATCGACGC TGTCAATGCC GCCCCGGTCA TTCCCGGCAC CGTGCTGGGC
GACAGGATGG GCAGGCAGCC GGAAGGCAAG GGCGAATCCG CCTGCGGCTG TGCCGGGCAT
GCCGGACATG CAGGACACAC CGGACGGCAC GACCATTTCC ATGTTGTCCA CCCCGGCACC
AACTGGCGGA GCCAGATCGA ACATGCCGAG GCACTGGGGC TTGGCAGCGG AACCTACGAA
CTGGTGACCG TCAAGTAA
 
Protein sequence
MSETTKSGKV HASPASASNE RPARGSKAAK AGTKQTAQKG TGPKGTKQAG AGAEPSKVFF 
TDMRCRIGTS LLDKLDKLML AAGMERINFQ NAFVAIKIHF GEPGNLAFLR PNFAKTVADR
VKKLGGMPFL TDANTLYVGR RNNALLHMDA AYENGFTPFS TGCHVVIADG LKGADEVEVP
IEGGVHLKTA KIGRAIMDAD VFISLNHFKG HELTGFGGAI KNIGMGSGSR AGKMIMHNNG
KPRVAHDKCV GCRTCARYCN QDAITFNEEQ KASINHELCV GCGRCIATCN FDAIDTPWSG
SSDDVNIRMV EYAKAVLDGR PNFHISVVNH VSPNCDCHGE NDAAIIPDIG IFASFDPVAL
DKACIDAVNA APVIPGTVLG DRMGRQPEGK GESACGCAGH AGHAGHTGRH DHFHVVHPGT
NWRSQIEHAE ALGLGSGTYE LVTVK