| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0584 |
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| Symbol | hemC |
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| ID | 7172471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 691772 |
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| End bp | 692725 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539084 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_002435009 |
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| Protein GI | 218885688 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 0.415079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAC TCGTCATCGC CACCCGTGGC AGCAAGCTGG CCCTGTGGCA GGCCGAACAC
GTCAAATCCT GCATCGAAGG CCAGCACCCC GGCGTTTCGG TGGAACTGCT GGTCCTGAAG
ACCCGTGGGG ACATCATCCT CGACGTGCCG CTGGCCAAGG TGGGCGGCAA GGGCCTGTTC
GTGAAGGAAA TCGAAGAGGC GCTGCTGGAT GGCCGGGCCG ACCTGGCCGT GCACAGCATG
AAGGACGTGC CCATGGAACT GCCGGAGGGA CTGGTGCTGG GCATCATTCC CGAACGCGAG
GAGCCGTCCG ACACCTTCCT GTCCGTGCAC CACGACTCGC TGGCCGCCCT GCCCCACGGG
GCCACCGTGG GCACCAGCAG CCTGCGCCGC CAGTCGCAGC TGCTGGCCCT GCGCCCGGAC
CTGAACGTGG TCTCCCTGCG CGGCAACGTG GACACCCGGT TGCGCAAGCT TTCCGAGGGC
CAGTTCGACG CCATCATCAT GGCCACCGCA GGCATGAAGC GCCTTGGCCT TTCCGCGCCC
AGGAGTGAAG TGCTGGGGCC GCCCGCCTTC CTGCCCGCCG TGGGCCAGGG CGCGCTGGGC
ATCGAGTTCC GGGCCGACCG GGCAGACCTG CACGAACTGC TGGCCTTCAT GGAACATACC
CCCACCCGCA TCCGCGTGGA GGCCGAACGC GGCTTTCTGG CCGGGTTGCA GGGCGGCTGC
CAGGTGCCCA TTGCCGGGCA CGCCGTTATG ACCGGCGACG GCACCTTTGC CCTGGAAGGC
CTTGTGGCCG ACCTGACCGG CGCGCGGGTG ATCCGCCGCA CCATGAACGG CGTCAGCGCC
CCCGACGGCG CGCAGGCCCG CCAGATCGGC CTGGACCTTG CCGCGCAACT GGTGGCCGAC
GGCGCCGGGG AAATCCTGGC CGAGGTGTAC GGCAGCGGCG AGGCGGTGAA CTAG
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| Protein sequence | MKKLVIATRG SKLALWQAEH VKSCIEGQHP GVSVELLVLK TRGDIILDVP LAKVGGKGLF
VKEIEEALLD GRADLAVHSM KDVPMELPEG LVLGIIPERE EPSDTFLSVH HDSLAALPHG
ATVGTSSLRR QSQLLALRPD LNVVSLRGNV DTRLRKLSEG QFDAIIMATA GMKRLGLSAP
RSEVLGPPAF LPAVGQGALG IEFRADRADL HELLAFMEHT PTRIRVEAER GFLAGLQGGC
QVPIAGHAVM TGDGTFALEG LVADLTGARV IRRTMNGVSA PDGAQARQIG LDLAAQLVAD
GAGEILAEVY GSGEAVN
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