Gene DvMF_0571 details

Gene Information

• Locus tag: DvMF_0571
• ID: 7172458
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 675004
• End bp: 676917
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643539071
• Product: outer membrane autotransporter barrel domain protein
• Protein accession: YP_002434996
• Protein GI: 218885675
• TIGRFAM ID: [TIGR01414] outer membrane autotransporter barrel domain

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 61
• Fosmid unclonability p-value: 0.0405147
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGTCTTGC TCTTGCGCCT GTGGCTTTCA CAGGCAACCG AACCTTCGCG GCGCACGCGC 
AGCCATTCCG CGCGCGCTGC GGCGGCGCTA CTCTTTCTCG CGCTGCTCGC GCCGGGCGCG 
CCCCTGTGGG CCGCCAACTC TGGCGGCACC ACCGAAACCT TACCGAGCTT CGAATTCGCG 
CATCCCGGCT ACGTTGGCAG CTTTCAGCCC GGCGCCACCG ACGCCACGGG CGGGAACCTC 
ACCATCGACA CAGGCATTAC CGGCCCCATA ATCGGCGGCT ACAGCGATGG CGGCAACGCC 
AATGGCAACC GGGTAACAAT CACCGGCGGC ACACATACCG GCGAAGGGAT ATACGGCGGC 
TTCAGCGACG GTTCAGGCAA CGCCAGCAAC AACATCGTGA CCATCACTGG CGGCACCATA 
AGCTACATGG TATTCGGGGG GTATTCTCAG GGTGGCACCG CCACCGGCAA CACCCTGCGC 
ATTTTCGGCA ACCCCACACT GAGCGCTGGC CTTGTTGGCG GTCGCGCCCC GCAGGCCAGC 
ATGTTTGACC CCGTCAGGGA CGCCCGCACC GGCAACACGC TGGAAATCCA CACCCTGAAC 
CTTCAGTCAA GTGGCATCGA AGGGTTCCAG CACTTCCGCT TCTACCTGCC TGATACGGTC 
CGGGCGGGCG ATACGGTGCT CACCGTGAAT AACGGAGTTG TTATCGAGAC GCCCTCCAGC 
GGCCCTTCCA CCGCCCCCAC CACCGTGGGC GTGGGCATTG AGGGCGGCGG AACCCCGCTG 
GCCGTCAACG ACACCGTTAC CCTCATCAAA AGCACCGGCG CCCTCTACGC CGACACGGGC 
ATGACCAACA CCACAACGGG CATGGCGGGC ATTTCCAGCC TCTACACCTT CGGTCTGGAA 
ACAACCGTCA ACAGTCTGGT GGCCCGGGTT ACCAGCATCG AACAGACGGA CGAAATCGTG 
CGCAAATCCC CGTCCGAGGG CAAGGCGGCC AGCATCGCCC TTGTGACGCA AGGCGCGGAC 
CTTGCGGCCG GGCCGGGCAT GGGCAACGCG CGCGCGGCAG CCGTCCTTGG CGCGGACAAC 
ATGGCGCAGG CAGGCTGGGC GGGCTTTGGC GCCACGTCCG GCGGCACATC CCGCTATGCA 
ACCGGGTCTC ATGTGGACAT GCAGAGCTTC TCGCTCATGA CCGGCCTGGC CAAACGCCTG 
CCCGTGAGCG GCGCGGACCT GCTTGTGGGG GCCTTCTTTG AAACAAGCGT CGGCTCCTAC 
GACAGCCACA ACGAAACGGC TGCGGGCGAA AGCATCACGG CCCGGGGCGA CAGCCGTTCC 
ACCGGCGGCG GGCTGCTGGG CCGGGTGGAA GCCACCACAG GCATGGCGCG CGGACTGTAC 
GCAGAAGCAA CGGTGCGCGC GGGCAGGCTC AGTTCCGACT ACAGGAGCGA CGACCTGAAC 
CCCACGCTGG GAGAGGCCGA ATACGACATC AACGTCGCCT ACTACGGCGC GCACGCGGGC 
GTGGGGTATA TCTGGAACAT CAGCGAACAG GCCTGGCTTG ACCTGTACGG CAAGTACTTC 
TGGACGCACA CCACCGGGGC GGACGTGCGC ATACTGGGCG ACCCGGTAAC GTTCGACGAC 
GTGGATTCGT ACCGCACCCG CCTTGGGGCG CGCTTTGGCT ACGCGCTGAA CAAGTGCATC 
ACGCCGTACA CCGGTGCGGC ATGGGAATAT GAATTCGACG GCACGGCGCA CAGCGTGGTG 
GCCGGGGTCG ACGCACCCGC GCCAACCCTG AAGGGCGGCA CGGGCGTGGG CGAGGTGGGC 
ATCATATGGA AGCCCCTGCC GGACAGCGGC TTTTCGCTCG ACCTTGGCGC ACAGGACTAC 
ACCGGCGTAC GCGAAGGCGT GGGGGGCAAC CTGTCGCTGA TGTACGAGTT CTGA 

 

Protein sequence

MVLLLRLWLS QATEPSRRTR SHSARAAAAL LFLALLAPGA PLWAANSGGT TETLPSFEFA 
HPGYVGSFQP GATDATGGNL TIDTGITGPI IGGYSDGGNA NGNRVTITGG THTGEGIYGG 
FSDGSGNASN NIVTITGGTI SYMVFGGYSQ GGTATGNTLR IFGNPTLSAG LVGGRAPQAS 
MFDPVRDART GNTLEIHTLN LQSSGIEGFQ HFRFYLPDTV RAGDTVLTVN NGVVIETPSS 
GPSTAPTTVG VGIEGGGTPL AVNDTVTLIK STGALYADTG MTNTTTGMAG ISSLYTFGLE 
TTVNSLVARV TSIEQTDEIV RKSPSEGKAA SIALVTQGAD LAAGPGMGNA RAAAVLGADN 
MAQAGWAGFG ATSGGTSRYA TGSHVDMQSF SLMTGLAKRL PVSGADLLVG AFFETSVGSY 
DSHNETAAGE SITARGDSRS TGGGLLGRVE ATTGMARGLY AEATVRAGRL SSDYRSDDLN 
PTLGEAEYDI NVAYYGAHAG VGYIWNISEQ AWLDLYGKYF WTHTTGADVR ILGDPVTFDD 
VDSYRTRLGA RFGYALNKCI TPYTGAAWEY EFDGTAHSVV AGVDAPAPTL KGGTGVGEVG 
IIWKPLPDSG FSLDLGAQDY TGVREGVGGN LSLMYEF