| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0567 |
|---|
| Symbol | |
|---|
| ID | 7172454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011769 |
|---|
| Strand | - |
|---|
| Start bp | 668868 |
|---|
| End bp | 671456 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643539067 |
|---|
| Product | ATP-dependent chaperone ClpB |
|---|
| Protein accession | YP_002434992 |
|---|
| Protein GI | 218885671 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 0.0522418 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACATCA ACAAGTTTAC CGAAAAATCG CAGCAGGCCA TTGCAGAGGC CCAGTCCACC
GCCGTGCGCC TCGGGCACCA GCAGGTGGAC GTGGAGCACG CCGCGCTGGC CCTGGTCCGT
CAGGAGCAGG GGCTGGTGCC TCGCCTGCTG GAACGGGCGG GCTACAAGCC AGACGCCTTC
GCCGGCGCCC TCGAAGCGGC GTTGCAGAAG CGCCCGGCGG TCAGCGGCCC CGGCGCGGCC
CAGGGGCAGA TATACGTCAC CCAGCGCCTG AACCAGGCCC TGGTGCGCGC GCAGGACTTC
GCCAAGCGGC TCAAGGACGA GTACGTCAGC GTTGAACACC TCATCTGCGC CTTTCTGGAA
GAACCGCCCT CCACCGACAT GGGCCGCGTG GCCCGCGAAT TCGGTCTGAC CCAGGACAAG
CTGCTGGCCG TGCTGGAAGA CGTGCGCGGC GCGCAGCGCG TCACCTCGCA GAATCCGGAG
GACACCTACG AGGCGCTCCA GAAGTACGGG CGCGACCTGG TGGAAGAAGC CCGAAAGGGC
AAGCTGGACC CGGTCATAGG GCGCGACGCG GAAATCCGCC GCGTGGTGCG CATCCTGTCG
CGGCGCACCA AGAACAACCC CGTGCTCATC GGCGAGGCGG GCGTGGGCAA GACGGCCATC
GTCGAAGGCC TCGCCCACCG CATCCTGAAG GGCGACGTGC CCGAAGGCCT GAAGAACCGC
AGCCTGTTCG CGCTGGACAT GGGCGCGCTC ATCGCCGGGG CCAAGTACCG GGGCGAGTTC
GAGGAACGGT TGAAGGCGGT CCTGAAGGAA GTGGAAAAGG CCGAGGGCCG CATCGTCATG
TTCATTGACG AACTGCACAC CATCGTGGGC GCGGGCAAGA CCGACGGGGC CATGGATGCG
GGCAACCTGC TCAAACCCAT GCTGGCGCGC GGCGAGTTGC ACTGCATCGG CGCCACCACC
CTGGACGAGT ACCGCAAGTA CATCGAGAAG GATCCCGCGC TGGAGCGTCG CTTCCAGCCG
GTGGTGGTGG ACGAGCCCAC GGTGGAGGAC ACCATTTCCA TCCTGCGCGG CCTGCGCGAA
CGGTTCGAGG TGCACCACGG CGTGCGCATC AGCGATTCGG CCATCGTCGA GGCGGTGACC
CTGTCGCACC GCTACATCAC CGACCGCCAG TTGCCGGACA AGGCCATCGA CCTCATCGAC
GAGGCGGCGG CGCTGATCCG CACCGAAATC GATTCGCTGC CCGCCGAACT GGACGAGGTG
AACCGCAAGG TCATGCAGCT TGAGATCGAG CGCGAGGCCC TGCGCCGCGA GACGGACGCC
GCCTCGCGCG AGCGGCTGGA AAAGCTGGAG AACGAACTGG CCGACCTGCG GGCCAGCCAG
GCCACCCTGC TGGCCCAGTG GGAACGCGAA AAGGGCTCCA TCGATGCCGT GCGCACCATC
AAGGAAGAGA TCGAACGCAC CCGCCTGGCC ATCGACGAGG CGGAACGCAA CTACGACCTC
AACCGCGCGG CGGAACTGAA GTATTCCAAG CTGCTGGAGC TTGAGCGCAA GCTGGCCGCC
GCCGAACGCG GCGACGACGA GAATCGCCTG CTGAAGGAAG AGGTGCGTCC CGACGACGTG
GCCGAAATCG TGGCCCGCTG GACGGGCATC CCCGTCACCC GGCTGCTGGA ATCGGAGCGC
GAGAAGCTGC TGCGCCTGGG CGACGTGCTG CACGAGCGCG TGGTGGGCCA GGACGAGGCC
GTGCAGGCCG TGGCCGAAGC AGTGTTGCGC GCCCGGGCCG GGTTGTCCGA CCCCGGGCGG
CCCATCGGGT CGTTCATCTT CCTTGGCCCC ACGGGCGTGG GCAAGACCGA GCTGTGCAAG
ACGCTGGCGG AATCGCTGTT CGACAGCGAG GACAACATCG TGCGCATCGA CATGAGCGAA
TACATGGAGA AGCACGCGGT GGCCCGGCTC ATCGGGGCGC CCCCCGGCTA CGTGGGCTAC
GACGAGGGCG GCCAGCTGAC CGAGGCGGTG CGCCGCAAGC CGTACAGCGT GGTGCTGTTC
GACGAGATAG AAAAGGCCCA CGCCGACGTG TTCAACGTGC TGCTGCAAAT CCTGGACGAC
GGGCGGCTTA CCGACAGCCA TGGCCGCACC GTGGACTTCA AGAACACCAT CATCATCATG
ACCTCCAACA TCGGGTCGTC GCACCTGCTG GACGGCATCA CCGACGAGGG CGAATTCCGC
CCCGGCGTGC GCGACAGGGT GATGGACGAA ATGCGCCGTC ACTTCCGGCC CGAGTTCCTG
AACCGGGTGG ACGAGATCGT CATGTTCCGC CCGCTGCTGC CCGAGCAGAT CGGGCGCATC
GTGGAACTGC TGCTGGGCAA GCTGCGGGGG CGTCTTGCAG AACGCAAGAT CACCGTGGAT
CTTTCCGACG CGGCGCGCGA CTTCATCGCG GAATCCGCCT ACGACCCGGT GTACGGTGCG
CGGCCCCTGC GGCGCTACCT GCAAACCAAC GTGGAAACCC CGCTGGCCCG CCGCCTGATC
GCAGGCGACC TGAAGGACGG GCAGCACGTG ACCATCGGGG TGCGGGTGGA CAAGCTGACG
TTTGAGTAA
|
|---|
| Protein sequence | MDINKFTEKS QQAIAEAQST AVRLGHQQVD VEHAALALVR QEQGLVPRLL ERAGYKPDAF
AGALEAALQK RPAVSGPGAA QGQIYVTQRL NQALVRAQDF AKRLKDEYVS VEHLICAFLE
EPPSTDMGRV AREFGLTQDK LLAVLEDVRG AQRVTSQNPE DTYEALQKYG RDLVEEARKG
KLDPVIGRDA EIRRVVRILS RRTKNNPVLI GEAGVGKTAI VEGLAHRILK GDVPEGLKNR
SLFALDMGAL IAGAKYRGEF EERLKAVLKE VEKAEGRIVM FIDELHTIVG AGKTDGAMDA
GNLLKPMLAR GELHCIGATT LDEYRKYIEK DPALERRFQP VVVDEPTVED TISILRGLRE
RFEVHHGVRI SDSAIVEAVT LSHRYITDRQ LPDKAIDLID EAAALIRTEI DSLPAELDEV
NRKVMQLEIE REALRRETDA ASRERLEKLE NELADLRASQ ATLLAQWERE KGSIDAVRTI
KEEIERTRLA IDEAERNYDL NRAAELKYSK LLELERKLAA AERGDDENRL LKEEVRPDDV
AEIVARWTGI PVTRLLESER EKLLRLGDVL HERVVGQDEA VQAVAEAVLR ARAGLSDPGR
PIGSFIFLGP TGVGKTELCK TLAESLFDSE DNIVRIDMSE YMEKHAVARL IGAPPGYVGY
DEGGQLTEAV RRKPYSVVLF DEIEKAHADV FNVLLQILDD GRLTDSHGRT VDFKNTIIIM
TSNIGSSHLL DGITDEGEFR PGVRDRVMDE MRRHFRPEFL NRVDEIVMFR PLLPEQIGRI
VELLLGKLRG RLAERKITVD LSDAARDFIA ESAYDPVYGA RPLRRYLQTN VETPLARRLI
AGDLKDGQHV TIGVRVDKLT FE
|
|---|
| |