| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0563 |
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| Symbol | |
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| ID | 7172450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 662862 |
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| End bp | 665171 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643539063 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_002434988 |
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| Protein GI | 218885667 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.0025752 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCTTCA AGAGCATCTC CACGCAGATC ACCGTCCTTA CCGGCGGGCT GGTCATCTTC
TTCATGTGCG CGTTCGTGTT CATTGCGTCC AAAACCTCCT ACGACGGCAC GCTGCGCAGC
GAAACCGCCA ACATGGTCCA GGTGGGACAG CAGATCGAAA AGGTGGCCGA AGACTTCGTG
ACCAGCAACC TCACCGCCGT GCGCGGGCTG ACCCAGCAAA AGGCGCTGGC CAGCGGGGTG
CTGTACGGCA GCGCCAGCCT GGTCATGAAG GACCAGTTGC AGCAGACCCT GAAGGGCAAT
CCGCATTACG CCGCCATCTT TGCGTTCGAT GCCGCGGGCA AGGTGCTCTA CGGGTATACC
GACGACGGAC AGGAGATTTC CGGCAGGCAA CTGGAGATGC CCGAGGTGCT CGCCGCCGTC
GCCGCGGGCA AGGAATTCGT CGACAGCACG CCGTTCAAGG GCCCCAAGGG GGACGTGCTG
TTCACCATCG CCGCCCCGGT GCTTAACGTC ATGGGGCAAT CGGGCGGGGG CATCGCCATC
ACCCTCGACT GGACCAGCTT CAGCGACCGC TTCGTGGGAA GCGTGAAGTT CGGCCAGCAG
GGGTACCCCT TCGTGCTTGA CGCCAAGGGG CGTTTCCTCT CGCATCCCAA CAAGGCCCTG
CTGCTCACCG ACGCGGCGCA GTACGACTTC GCCCGTGCTG TCCTGGCGCA GCAGACGACA
CAGTTCGAAT ACCTCTGGGA CGGCAAGACG AAAATCCTCG TCAGCTGTAC CATGCCCATA
ACGAATTGGA AAATATGCTC TTCTGCCTAC GAGGACGATC TGGCCACCGT GGCGCGCCAG
CAGCGCATGC TGCTGGCAAT AATGGGGCTG GTGGCCATCG TGGCCTTGAC CGGCTCCATC
GTGCTGCTTA CCCAGCGCCT CATTCTCGGG CCCATGAACC GCATCCGGCA ATTCGCCGGG
CAGGTGGCGC AGGGCGACCT GCGCGCCGTC ATGGACGGCG CCTACCATTT CGAACTGGAC
GAACTGGCTA CCTCCATCCG GATCATGGTG GCCGAGCTGA AGGAAAAGCT GGGGTTCTCG
CAGAGCGTGC TGGAGGCCAT GGTGGTGCCC GTGCTGATCG TTGACCGCGA GGAACGCACG
GTGTTCACCA ACAAGGCCTG CATGGACATG CTGGAAATCG ACACCGACCC CAAGGCGCAG
TACGGCCGCA CCCTGGCCGA GGTATTCTAC AACGAGCCGG GCCGCAAGAC CGCCGTGGGC
CGGGCCATGA ACGAGAAGAC CAGCATCAAG AACCTGGAGG TGGTCATCGC TGGCCACAAG
GGCGGCAAGG TGGACGTGCT GGCCAACGTC ACTTACCTTC AGGATCTGGA CGGCAACGTC
ATCGGCGGCT TCTGCCTGTA CATCGACACC ACCGAGATGA AGCGCCAGGC CGCCATCATC
GCGGAACAGA ACGAACGCAT CGCCCGCGCC TCGGCAGAGG CGGATGACGT GGCCTCGCAA
CTGGCCACCG CGTCGGAGCA GCTTTCGGCG CAGATCGAAC AGTCCGCGCG CGGCTCGGAC
ATCCAGCGCG AGCGCACCGC CGAGGCGGCC ACCGCCATGG AACAGATGAA CGCCAGCGTG
CTGGAAGTGG CCCGCAATGC GGGCGGCGCC GCCGAAATGG CCGAAAAGGC CAAGATCCGC
GCCCAGGAAG GGGCCGAGGT GGTGGACGGC TCGGTGCGCA CCATCCAGCA TGCCCATGAG
CTGGCATCGC ACCTCAAGTC CGACATGGCC GAACTGGGCA CCCAGGCCCA GGGCATCGGC
CAGATCATGA ACGTCATCGC CGACATCGCG GACCAGACCA ACCTGCTGGC GCTGAACGCC
GCCATCGAGG CGGCGCGGGC CGGTGACGCC GGGCGCGGCT TTGCCGTGGT GGCCGACGAG
GTGCGCAAGC TGGCCGAAAA GACCATGACC GCCACCAACG AGGTGGGCAG CGCCATCCGG
GGCATTCAGG AAAGCGCGCG CAAGAACATC GCCAACACCG AAAAGGCCAC CGCCGCCATA
GAGGAAGGCA CTGGCATGGC CCGCCGCTCC GGCGACGTGC TGCGCGAAAT AGTGGGCCTT
GTGGAGAGCA CGGCGGACCA GGTGCGGTCC ATCGCCACGG CGTCGGAACA GCAGTCCGCC
GCAAGCGAGG AAATCAATCG CTCCACCGAC GAGATTACCC GCATCGCCGC CGAAACGGCG
GAAGCCATGC GCCACTCGGC GCAGGCGGTG GAAGATGTCT CGCGGCTGGC TTCGGACCTG
AAGCGGATTA TTGGCGACAT GCACAGTTGA
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| Protein sequence | MRFKSISTQI TVLTGGLVIF FMCAFVFIAS KTSYDGTLRS ETANMVQVGQ QIEKVAEDFV
TSNLTAVRGL TQQKALASGV LYGSASLVMK DQLQQTLKGN PHYAAIFAFD AAGKVLYGYT
DDGQEISGRQ LEMPEVLAAV AAGKEFVDST PFKGPKGDVL FTIAAPVLNV MGQSGGGIAI
TLDWTSFSDR FVGSVKFGQQ GYPFVLDAKG RFLSHPNKAL LLTDAAQYDF ARAVLAQQTT
QFEYLWDGKT KILVSCTMPI TNWKICSSAY EDDLATVARQ QRMLLAIMGL VAIVALTGSI
VLLTQRLILG PMNRIRQFAG QVAQGDLRAV MDGAYHFELD ELATSIRIMV AELKEKLGFS
QSVLEAMVVP VLIVDREERT VFTNKACMDM LEIDTDPKAQ YGRTLAEVFY NEPGRKTAVG
RAMNEKTSIK NLEVVIAGHK GGKVDVLANV TYLQDLDGNV IGGFCLYIDT TEMKRQAAII
AEQNERIARA SAEADDVASQ LATASEQLSA QIEQSARGSD IQRERTAEAA TAMEQMNASV
LEVARNAGGA AEMAEKAKIR AQEGAEVVDG SVRTIQHAHE LASHLKSDMA ELGTQAQGIG
QIMNVIADIA DQTNLLALNA AIEAARAGDA GRGFAVVADE VRKLAEKTMT ATNEVGSAIR
GIQESARKNI ANTEKATAAI EEGTGMARRS GDVLREIVGL VESTADQVRS IATASEQQSA
ASEEINRSTD EITRIAAETA EAMRHSAQAV EDVSRLASDL KRIIGDMHS
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