| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0556 |
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| Symbol | |
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| ID | 7172443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | + |
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| Start bp | 656767 |
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| End bp | 657711 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643539056 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002434981 |
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| Protein GI | 218885660 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.000303867 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCAGAA AACCAACTGA CGCCGCCGAT TCCGTCAGGC CTGCCGGGCC AACGGGTTCC
GCCGATTCCG CCTGGACGGA AGCACCCGGC GCTTCCGCCC AGTTGCTGGA CGAACTGGAC
GCCCTGCGCC GCGCGCTGGC CGAAGAAGCC GCGCGCAACG CGCCCGACAC TCCGGACATG
CCTGACGATG AGCCCACCGA CGGCCCCCTG CTGGCCGTGG CCCGGCTGTT TCCGGGCATG
ACCCGGCACC GCTGGCTGGC CCTGGCCGAA GAACACGGCC TGCGCCAGTG GTTCGCCATC
GACCTGGACA AGAGCACCAA CTTCAACCTG CGCGAACTGC AAAAGGCCGT GGAAGAGCTG
ACCCACCAGC GCGACCACGA CCCCCTCACC GGCCTGATGA ACCGCCGGGC CTTCCTGCGC
CAGGTCGAGC TGGAACTGCA ACGGGTGCAC CGGGGCGGTG CGGAACTCTG CCTGGCCATG
CTGGACCTGG ACGACTTCAA GCGGGTCAAC GACACCTGGG GCCACGCCTG CGGCGACCTT
GTGCTGCGGC GCATGGCCGA CCTGCTGCGC GACGCCACCC GGGCCTACGA CGTGGCGGCC
CGCATCGGCG GAGAGGAATT CGTGCTGCTG CTGCCGGGCG CCTCGCCCAT GCGCGCCCAG
GCCCTGCTGG AGCGACTGTT GCAGGACATG CGCGACGAAA CCTTCGAGTG CCGGGACGAA
ACCTTCCGGA TCAGTTTTTC GGCGGGCATC GCCGGGTGCA AGGGCGCCAC GGTGTGCCGG
GCAGAAGAAC TGCTGGACCG GGCGGACAAG GCCCTGTACG AGGCCAAGGC CTCGGGCAAG
GCCCGCGTGC GGGTGCACCG GCTGCCGGGC GTGCCGGACT ACGACCGCTC GACCATGGTG
CAGTCGGACG AGAAGCAGTT TCTTTTTTCG GGAAATGACG ACTAG
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| Protein sequence | MARKPTDAAD SVRPAGPTGS ADSAWTEAPG ASAQLLDELD ALRRALAEEA ARNAPDTPDM
PDDEPTDGPL LAVARLFPGM TRHRWLALAE EHGLRQWFAI DLDKSTNFNL RELQKAVEEL
THQRDHDPLT GLMNRRAFLR QVELELQRVH RGGAELCLAM LDLDDFKRVN DTWGHACGDL
VLRRMADLLR DATRAYDVAA RIGGEEFVLL LPGASPMRAQ ALLERLLQDM RDETFECRDE
TFRISFSAGI AGCKGATVCR AEELLDRADK ALYEAKASGK ARVRVHRLPG VPDYDRSTMV
QSDEKQFLFS GNDD
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