Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0513 |
Symbol | |
ID | 7172400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 604864 |
End bp | 605730 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643539013 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002434938 |
Protein GI | 218885617 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 0.0204845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAT CGAAATATCT CGTCATTTAT GAATGGCTTT CCGAACAGAT ACGGAACAAG GTGTATCAGC CGGGGGACAA GATTCCCAAC GAGAGCGATC TGGCCGCCAT GTTCGGTGTG CATCGCATGA CCGTGCGCCA GGCCATCGAC AAGCTGGTCA ACGATCACAT GCTGGTGCGC AAGCGCAGCA AGGGCACGTT CCTGCTTTCG GAAAAGAGTC CCGTGCTCAC CCGTTCGCTG GAAAGCATCA CCACGTACTA CGACGACATC GTCAGCGCCG GGCTTGCCCC GCACTACAAG ACCATCGCGG CGGGCATAGA GTATGCCGAT GCCGAGGTAG CCGCACACCT GAACCTTGCC GAGAGGCAGC CGGTGATCTT CCTGTACCGG CTGATGCTGG CCAGCGGCGT GCCGCTGGTG CTGGAGCGGT CCATCCTGCC CACGGACATG GTGCCGGACT TTCTGGAAAA GAAGCTGGAT ACCGTGCTCT ACAAGGTGCT GCACGAGGAC TACGGCATGC GCCTCTTGTA TTCGCGCCAG GAACTGGGGG CCGTGATGCC CACGGAAAGC GAGCGCAAGC ACCTGAAGAT TGGTGACAAC TGTCCGTGCA TCTGGGTGGA GAGCGTGGTG TACACCGATA CGGGCCGGGC CGTGGAATAC AGCCGCGCCC TGCACCGGGG CGACAAGTAC CGTTTTCGTT GCGCCATCGG CGGGTACGTG TACGACAAGG ATGGCACCGC CGGGCAGACG CCGCTTGCAG GCTTCTTCGT GGATCCTTCC GGCGGGGGCG AGGCTGGCGG TACTGGCGCG GCTGGCCCGA ACGGGGGGCA AGGCCCGGCC AGCCGGTCCG GACAGGTCAA GGGTTGA
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Protein sequence | MGKSKYLVIY EWLSEQIRNK VYQPGDKIPN ESDLAAMFGV HRMTVRQAID KLVNDHMLVR KRSKGTFLLS EKSPVLTRSL ESITTYYDDI VSAGLAPHYK TIAAGIEYAD AEVAAHLNLA ERQPVIFLYR LMLASGVPLV LERSILPTDM VPDFLEKKLD TVLYKVLHED YGMRLLYSRQ ELGAVMPTES ERKHLKIGDN CPCIWVESVV YTDTGRAVEY SRALHRGDKY RFRCAIGGYV YDKDGTAGQT PLAGFFVDPS GGGEAGGTGA AGPNGGQGPA SRSGQVKG
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