Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0506 |
Symbol | |
ID | 7172393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 594654 |
End bp | 595739 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643539006 |
Product | PGAP1 family protein |
Protein accession | YP_002434931 |
Protein GI | 218885610 |
COG category | [R] General function prediction only |
COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 0.00221392 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCCTGC TGCTGGTGCC GCTGTGCATC GCCCTGACAA TAGCCGTCAT CAGTTACCTG CTGTTCTTCC GCGCCGCGCG CCGCGACACC GCCCCCACGC CCCCTGCCTC GCTGGTGGTG CGGGGCGTGA TCCACAGCGT GGTCGGGGGG ACTCTGGCCC TGTCCCTGTA TCCGTTCGGC CCGTGGTTCC GGCGGCGCTG CCGCCCCTGC CCCTTTCCGC GCCGGGCCGC GCCGGAAGGT CGACATCGCG CGGAGGCGCC GTGCGCAGGC TCCACCGACG CATGCTCACC GCGTGCCAAC TTGCCGCAAG CGCTGCCGCC AGTCCTGCTC ATCCACGGCC TGTACCACAA CGTCACGGCA TGGACCCTGT ACCGCCGCTG GCTGAACGAA GCCGGTTTCA CACGGGTATA CTGCCACGGC TATTCCAGCT GGCATACCGG GTTCGGGCTG CTGGTCGACG AACTGGACGA GACGATGCGC GACCTGCTGG CCGCGCATCC GGGTGAAAAG CCCCTGCTCG TGGGGCACAG CCTGGGGGGA TTGCTGATCC GGGGCTGGCT GGCCGACGCG GCCAACCAGC AACTGGTGGC CGGGGCCGTG ACCCTGGGCA CGCCGCATCA GGGCAGCACC CTGGCCCGGC TGGGCGCGGG GCGGCTGGCT CGCAGCCTGA CCTTCCGCGG GGCGCTGATC CGCGAACTGG AAGCCACCGA GGCCCCGTCC GACGTGCCCT GCGTGGCCCT GTATTCGCCC ATCGACAACA TGGTGGTGCC GCAGGAAGGG CTGCACGTGA CCACGCCCGG TTGGACCACG CGCGCTTCGC CCGCCGTGAG CCACATCTGG ATGCTCTGGG ACCGGGCCAC GGCGCGGCTG GCCATCGAAT CGCTGCGCGA ACTGGCTGAC CGGCACACGG CGCGGGAACG GCAGCGCCGC GCGTGCGGCG ACCCGGCGTC AGGCCAGATT GCATCGGGCC ACGCCGCATC GGGTCACGTC ATGCCCGACG GGACCCCATG CGCCGCAACC ACCCCGGAAC AGGCAGCAGG CTCCAAAAAT TCCGAACAGG AGAACCCCGG CTACAGCCGG GCGTAG
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Protein sequence | MSLLLVPLCI ALTIAVISYL LFFRAARRDT APTPPASLVV RGVIHSVVGG TLALSLYPFG PWFRRRCRPC PFPRRAAPEG RHRAEAPCAG STDACSPRAN LPQALPPVLL IHGLYHNVTA WTLYRRWLNE AGFTRVYCHG YSSWHTGFGL LVDELDETMR DLLAAHPGEK PLLVGHSLGG LLIRGWLADA ANQQLVAGAV TLGTPHQGST LARLGAGRLA RSLTFRGALI RELEATEAPS DVPCVALYSP IDNMVVPQEG LHVTTPGWTT RASPAVSHIW MLWDRATARL AIESLRELAD RHTARERQRR ACGDPASGQI ASGHAASGHV MPDGTPCAAT TPEQAAGSKN SEQENPGYSR A
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