Gene DvMF_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0486 
Symbol 
ID7172372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand+ 
Start bp570277 
End bp571266 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID643538985 
Product4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 
Protein accessionYP_002434911 
Protein GI218885590 
COG category[I] Lipid transport and metabolism 
COG ID[COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase 
TIGRFAM ID[TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.00257171 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCACCC ACGCCACGCC CGCGCCCGGC GTAGTCACCC TGCACGCGGG ATGCAAGGTC 
AACCTGTACC TGCGCATCAC CGGCGTGCGA CCCGACGGCT ACCACGAACT GGACACCCTG 
TTCCTGCCCC TGCCGGAACC GTGCGACCTG CTGCACGTGT CGCCCAGGGC GGAAGCGGGC 
ATCGTCTTCA CCTGCACCGA ACCGGACGTG GACCCGGCCC GCAACACCGT GGTCACCGCG 
TACGAGCGGT TCGCAGCGGC CACCGGGTTT CGCCCCGGAC TTGCGGTGCA CCTTGAGAAA 
CACATTCCGC ACGGGGCCGG CCTTGGCGGC GGCAGCGCCG ACGCCGCAGT GCTGCTGCGC 
CACCTTGCCG CGCTGTGCGC GCAGCAGGCC CCCGGCGCGG CCCCCACGCC CGAAGCCCTG 
CGGGCCATGG CCGCCGGGGT TGGCGCCGAC GTGCCCTTCT TTCTGATGGA TGGCCCCGCA 
CGGGCCAGCG GCATCGGCGT GGTGCTCACC CCGCTCGCCC CCGGCGAACT CGCCGACCTC 
GGGCTGGCGG GCATGCATCT GGTGCTGGCC TGCCCGCCCG TGCGCGTTTC CACGCCGTGG 
GCCTATCGGG CGTGGGATGC CGCCAACGTC ACCACCCCAG ACGACAACGC CCAGACCAGT 
ACCCGGACCA GTGCCCAGAA CAGTGCCCGG ATGATGACCG GGCAAAGCGC GAAATCATTG 
CGTCCTTGCT TGACATCGGA AAGTCTAGAA GATAGAAATC CACTCTCTCG CGGACCGTGG 
CTGACCAACA GCTTTGAACC GGTTGTTTTT CAGACACATG CAACCCTGCG CCGGACCAAG 
GAATTTCTTC TTCGACGCGG GGGCTGTGCC GCGCTGATGA GCGGGAGTGG CGCCAGCCTG 
TTCGCCCTGT TCAGAAAGCA CGGCACGGCG CGTGATGTGG CCGAAGCACT GCGCAACGAC 
AACATCGCGG CCTTTTTGCA CGCACTGTGA
 
Protein sequence
MSTHATPAPG VVTLHAGCKV NLYLRITGVR PDGYHELDTL FLPLPEPCDL LHVSPRAEAG 
IVFTCTEPDV DPARNTVVTA YERFAAATGF RPGLAVHLEK HIPHGAGLGG GSADAAVLLR 
HLAALCAQQA PGAAPTPEAL RAMAAGVGAD VPFFLMDGPA RASGIGVVLT PLAPGELADL 
GLAGMHLVLA CPPVRVSTPW AYRAWDAANV TTPDDNAQTS TRTSAQNSAR MMTGQSAKSL 
RPCLTSESLE DRNPLSRGPW LTNSFEPVVF QTHATLRRTK EFLLRRGGCA ALMSGSGASL 
FALFRKHGTA RDVAEALRND NIAAFLHAL