Gene DvMF_0484 details

Gene Information

• Locus tag: DvMF_0484
• ID: 7172370
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfovibrio vulgaris str. 'Miyazaki F'
• Kingdom: Bacteria
• Replicon accession: NC_011769
• Strand: +
• Start bp: 569014
• End bp: 569622
• Gene Length: 609 bp
• Protein Length: 202 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 643538983
• Product: Appr-1-p processing domain protein
• Protein accession: YP_002434909
• Protein GI: 218885588
• COG category: [R] General function prediction only
• COG ID: [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 57
• Fosmid unclonability p-value: 0.0030315
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGGACGATC TGTCCCTGAT CATCACCGCC CCTTCCGGCC ACGGCCTGCT GGCGGTGTCC 
ACCGGCGACC TTGCCGCCAC GGCGACCGAC GCGGTGGTCA ACGCCGCCAA TGCCGAACTG 
CGCGGGGGCG GCGGCGTGGA CGGTGCGCTG CATCGCGCCG CCGGGCCGAT GCTGCTGCCC 
GCAGGACGGG ACATCGTGGC CCGGCGCGGA CCGTTGGCCG CCGGAGAGGC CGTGATCACC 
CCCGGCTTCA ATCTGCCTGC CCGCCATGTC ATCCACGCCG TGGGCCCCAT CTGGCGCGGC 
GGCACGCACG GCGAGCCGCA GGCGCTGGCT GCGGTCCACG CCAACAGCCT GCGCCTGGCG 
GCGGAGCACG GGCTGGCACG GGTGGCCTTT CCGGCCATAA GTTGCGGCAG CTACGGCTAT 
CCGCCGGAAC TGGCCGCGCC CATCGCCCTG GCTGAAGCCG TGCGCGGCCT GCGGGCCGGG 
CTGGTGCGCG AGGTGCGCTT CGTCCTGCAC GGGCAGGCCA TGCTGGCTGT GTGGCGCACC 
GCGTTTCATG CCCTTGCCGG TCAGCGTGCC CCCGTTCACG AGGCGGGCGA CGGCCACACC 
AGCACGTGA 

 

Protein sequence

MDDLSLIITA PSGHGLLAVS TGDLAATATD AVVNAANAEL RGGGGVDGAL HRAAGPMLLP 
AGRDIVARRG PLAAGEAVIT PGFNLPARHV IHAVGPIWRG GTHGEPQALA AVHANSLRLA 
AEHGLARVAF PAISCGSYGY PPELAAPIAL AEAVRGLRAG LVREVRFVLH GQAMLAVWRT 
AFHALAGQRA PVHEAGDGHT ST