Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0429 |
Symbol | |
ID | 7172315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | - |
Start bp | 503665 |
End bp | 504339 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643538928 |
Product | OstA family protein |
Protein accession | YP_002434854 |
Protein GI | 218885533 |
COG category | [S] Function unknown |
COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 0.034618 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGACATA CCGGCATCCG CTCCGCGCTG TGCGTGGCGC TGCTGTTGAC CTTTTCCGCA CCCGCCATGG CGGCGGACGC CAAGTCGGCC ACGGAAGTGC GCCGCGACGT GCCCACCGCC GTCAAGTCCG ACCGCATGCA GTACGATGCC AAGGGCCAGG TGGTGATCTT CGAGGGTGAC GTGTACGTCC AGCGCCCCGA CTTCGAGATG TGGGCCGAAA AGATTACCCT GCACCTGCGC AAGAAGGCGG CCAAGCCCGG CAAGGCCGGG GCGGGGCAGG GCGCGGATGC GTCCGGAGCG GCTGGCCAAT CCGGTGCTGC GGGGATGTCC GGCATGGACG CGGGCGAGAT CGACCGCATG GTGGCCGAAC GCAAGGTGCG CATGAAGCGC GAAAACCGCA CCGGCGAATG CGAAAAGGCC ACCTACACCG TGGACAACGC CGTGCTGGTC ATGGAAGGCA ACCCCGTGCT GCACGAGGGC GAGAACAGCA TCAGGGGCGA TGTCATCACC TTCTACACCC GCGAAAACCG CAGCGAAGTG CGCGGCACCT CCACCAAGCG GGTTCAGGCG GTGTTCACCT CGTCCGGCGA CGTGAACCCC CTTGGCGACA AGGATGCCAA GCCCGCTCCC AAGGACGCCA AGGGCGATGC CGCCACCGGG GGGGCTGCCC AGTGA
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Protein sequence | MRHTGIRSAL CVALLLTFSA PAMAADAKSA TEVRRDVPTA VKSDRMQYDA KGQVVIFEGD VYVQRPDFEM WAEKITLHLR KKAAKPGKAG AGQGADASGA AGQSGAAGMS GMDAGEIDRM VAERKVRMKR ENRTGECEKA TYTVDNAVLV MEGNPVLHEG ENSIRGDVIT FYTRENRSEV RGTSTKRVQA VFTSSGDVNP LGDKDAKPAP KDAKGDAATG GAAQ
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