Gene DvMF_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0429 
Symbol 
ID7172315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp503665 
End bp504339 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content67% 
IMG OID643538928 
ProductOstA family protein 
Protein accessionYP_002434854 
Protein GI218885533 
COG category[S] Function unknown 
COG ID[COG1934] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03002] lipopolysaccharide transport periplasmic protein LptA 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.034618 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACATA CCGGCATCCG CTCCGCGCTG TGCGTGGCGC TGCTGTTGAC CTTTTCCGCA 
CCCGCCATGG CGGCGGACGC CAAGTCGGCC ACGGAAGTGC GCCGCGACGT GCCCACCGCC
GTCAAGTCCG ACCGCATGCA GTACGATGCC AAGGGCCAGG TGGTGATCTT CGAGGGTGAC
GTGTACGTCC AGCGCCCCGA CTTCGAGATG TGGGCCGAAA AGATTACCCT GCACCTGCGC
AAGAAGGCGG CCAAGCCCGG CAAGGCCGGG GCGGGGCAGG GCGCGGATGC GTCCGGAGCG
GCTGGCCAAT CCGGTGCTGC GGGGATGTCC GGCATGGACG CGGGCGAGAT CGACCGCATG
GTGGCCGAAC GCAAGGTGCG CATGAAGCGC GAAAACCGCA CCGGCGAATG CGAAAAGGCC
ACCTACACCG TGGACAACGC CGTGCTGGTC ATGGAAGGCA ACCCCGTGCT GCACGAGGGC
GAGAACAGCA TCAGGGGCGA TGTCATCACC TTCTACACCC GCGAAAACCG CAGCGAAGTG
CGCGGCACCT CCACCAAGCG GGTTCAGGCG GTGTTCACCT CGTCCGGCGA CGTGAACCCC
CTTGGCGACA AGGATGCCAA GCCCGCTCCC AAGGACGCCA AGGGCGATGC CGCCACCGGG
GGGGCTGCCC AGTGA
 
Protein sequence
MRHTGIRSAL CVALLLTFSA PAMAADAKSA TEVRRDVPTA VKSDRMQYDA KGQVVIFEGD 
VYVQRPDFEM WAEKITLHLR KKAAKPGKAG AGQGADASGA AGQSGAAGMS GMDAGEIDRM
VAERKVRMKR ENRTGECEKA TYTVDNAVLV MEGNPVLHEG ENSIRGDVIT FYTRENRSEV
RGTSTKRVQA VFTSSGDVNP LGDKDAKPAP KDAKGDAATG GAAQ