Gene DvMF_0425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0425 
Symbol 
ID7172311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp499989 
End bp500438 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID643538924 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_002434850 
Protein GI218885529 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value0.0194997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTTT CGGAGTATCT TCACGATGAT CTGATCCTGC CCGAGCTCTC CGCCGGCACC 
AAGAAAGAGG TGCTGGCGGA ACTCGTGCAG GCCGTGGTAC GGCGGCATCC CGAAGTGGAT
GCCGCCGTTG CGCTGGGCGT GCTGAACGAC CGCGAATCGC TGGGCACCAC CGGCATAGGC
GACGGCGTGG CCATTCCCCA CGGCAAGCTG GCCAACATCA GCGACATCGT GGTGATCGTG
GGCCGCAGCG TGCCGGGCAT CGACTTCGAT GCGCTGGACA TGAAGCCCTG TCACCTTTTT
TTCCTGGTGC TGGCCCCGGA ACAGGTGGCG GGCATGCACC TGCGCATTCT GGCCCACATC
TCGCGCCTGC TGAAGGATCC GCAGTTTCGC CGCGCCATGA TCGCGGCGCA GGACGGCGAG
GCCTTCCGGG CGATCATGCG AACCACCTGA
 
Protein sequence
MRLSEYLHDD LILPELSAGT KKEVLAELVQ AVVRRHPEVD AAVALGVLND RESLGTTGIG 
DGVAIPHGKL ANISDIVVIV GRSVPGIDFD ALDMKPCHLF FLVLAPEQVA GMHLRILAHI
SRLLKDPQFR RAMIAAQDGE AFRAIMRTT