| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0417 |
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| Symbol | |
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| ID | 7172303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 489026 |
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| End bp | 492730 |
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| Gene Length | 3705 bp |
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| Protein Length | 1234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643538916 |
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| Product | pyruvate carboxylase |
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| Protein accession | YP_002434842 |
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| Protein GI | 218885521 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1038] Pyruvate carboxylase |
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| TIGRFAM ID | [TIGR01235] pyruvate carboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.00734861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGGCATCA AGACCTTCGA GCAGGTGTTG GAAGAGGTGA GGGGCAAGGC GATTCTGGTG
GCCAACCGGG GTATCCCGGC CCGCCGGATC TGTCGTTCCA TCCGCGAACG CTTCGATGCC
GTGGCCGTGA TGACCGCCAC CGACATCGAC AAGACCTCTC CGGCCGCCTC CGCAGCGCAA
GAACTGCTGC TGCTGGGTTC CGACCCCAGA GCGTATCTGG ACATCGACCA CATCATCGCG
CTGGCCAAAC AGCGCGGCAT CGTCGCCATC CATCCCGGAT GGGGCTTCGC CTCCGAAGAC
GAACGCTTCC CCGCCAAATG CAAGGCCGCC GGGCTGACCT TCATCGGGTC CACCGCAGAG
GCCATGAACC TGCTGGGCAA CAAGGTGCAG GTCCGCAAAC TGGCAAAGAA GCTGGACATC
CCCGTTGTTC CCGGTTCCGA AGGGGCCGTG GACATTCCCA CCGCGCGCAC CATCATCGAC
GAGATCGGCC TGCCGGTCAT GCTGAAGGCG GAAGGCGGGG GCGGCGGCCG GGGCATCTTC
GCCATCCATC GGGCCGAAGA ACTTTCCGAT GCCTTCATGA AGGCGTCCAC CATGGCCCAG
GCCTCGTTCG GCAACCCGCG CCTGTACGTC GAAAAGTACC TGCCCTCGGT GCGCCACATC
GAAATCCAGG TCATCGCCGA CATGTACGGC AACGTGTTCG CCTTTGACGA ACGCGACTGT
ACCGTGCAGC GCAACCACCA GAAGCTCATC GAGATCACCC CGTCGCCGTG GTCGGGCATC
ACCCCCGAAC TGCGCGAACG GCTGAAGGAA TACTCGCGCA TGCTGGTGCG CGAGGTGGGC
TACCATTCGC TGTGCACCGT GGAGTTCCTG GTCACCGCCG ACGGCACGCC GTACCTGATC
GAGGTGAACA CCCGCCTCCA GGTGGAGCAC GGCATCACCG AATGCCGCTA CGGCATCGAC
CTGGTGGAAG AGCAGATCGC CGTGGCCTTC GGGGCCAGGC TGCGTTTCAC CGAGGAAAAC
ACCACGCCGC AGCACGTGGC CATGCAGGTG CGCATCAACT GCGAAGACCC GCAGAACCAT
TTCGCCCCCA ACTCCGGCCT GGTCAGCCGC TACGTGTCGC CCGGCGGCCC CGGCGTGCGC
CTGGACTCGA ACATGTGCGC GGGCTACGAG TTTCCGTCCA ACTACGACTC GGCGGGATCC
CTGCTCATCG CCTACGGGCA GGGCTGGGAA AAGGTGCTCG GCATCATGGA GCGCTGCCTT
GGCGAGTACG TCATCGGCGG CATCAAGACC ACCGTCCCGT TCTACAAGCA GGTGCTGAAG
CACCCCAAGT TCCGCGCGGG CGACCTGGAT ACCAACTTCA TCGCCAACAC CCCGGAACTG
ATGTGCTACT CCGACCTCGC CCCGGAGGCG GAGCGCCTGG CCCGGCTGGT GGCCGAGGTT
TCGGCCAAGG GTTACAACCC CTACGTGCAG CTGGGTGAAT ACCGCACCCG CGAAACCCCG
CGCATGCCCC GTTTCGAGCC GGTGCTGCCA CACATTCCCG GCACCGTGCG CCGCGCGCCC
TCGCCGTATC CCACCGGCGA CCGCACCGCG CTGCTGGACT ACCTGCGCGA CGCGGGCCAC
GTGCACTTCA CCGACACCAC CCCCCGCGAC ATGACCCAGT CGAACAGCGG CAACCGCTTC
CGCCTGGCGG AAGACGCGCT GATCGGCCCG TACCTGGACA ACTGCGGGTT CTTCTCCATC
GAGAACGGCG GCGGCGCCCA CTTCCACGTG GCGCTCCTGG CCAACATGAC CTACCCGTTC
TCGGAAGCGA AGGAATGGAA CCGCTTCGCG CCCAAGACGC TGAAGCAGAT ACTCATCCGT
TCCACCAACG TGCTGGGGTA CAAGCCGCAG CCCAAGAACC TCATGCGCAT GACCGGCGAG
ATGGTGTGCG ATACCCACCA CATCATCCGC TGCTTCGACT TCCTGAACCA CATCGAGAAC
ATGCGCCCCT TCGCGGAAGT TGCGCTGAAC CGCACCGACG TGGTCTTCGA ACCGGCGCTG
TCGCTGTCGT GGGCCAAGGG CTTCGACGTG GACCACTACC TCGGCGTCAC CGAGGAAGTG
CTGCGCATGG TGGGCAGCGT GGCCGGGGTT GGTCCCGACC AGGCCGCCAG AATGATCATC
CTGGGCCTCA AGGACATGGC GGGCATGTGC CCGCCCCGGT TCATGACCGC CCTGGTCACC
GCCCTGCGCA AGCGCTGGCC CTCTCTGGTG CTGCACTACC ACCGCCACTA CACCGACGGC
CTGTTCGTGC CGTCCGTGGG TGCCGCCGCC AAGGCGGGCG CGCACATCGT GGACGTGGCC
CTGGGCGCCT CGGTGCGTTC GTACGGGCAG GGCGACGTGC TGGCCACTGC CGCCTACCTC
GAGGACGAGC TGGGCCTGAA GACCAACCTG AACAAGAACA TGATCCGCGA CTGCAACTTC
GTGCTCAAGC AGATCATGCC GTACTACGAC CGCTACTGCG CGCCGTACTT CCAGGGCATC
GACCACGACG TGGTCGAGCA CGCCATGCCC GGCGGGGCCA CCTCGTCGTC GCAGGAAGGG
GCCATGAAGC AGGGGTACAT CCACCTCTTG CCGTACATGC TCAAGTTCCT GGCGGGCACC
CGCAAGATCG TGCGTTACCA CGACGTGACG CCCGGCTCTC AGGTGACCTG GAACACCGCC
TTCCTGGCCG TGACCAACGC CTACAAGCGT GGCGGCGAAG AAGAAGTGCG CTACCTGCTG
GAAGTGCTGG ACCACGTGGC CCGGCACGAC GAGGCCGACC TGACGGCGGA AATGCGCAAG
GCGCGCCTGT CCATCTACCA GGACTGCAAC GACGCCTTCC GCAACCTGCT GCTGGGCCGC
TTCGGCAAGC TGCCCCTCGG CTTTCCGGCG GACTGGGTGT ACGAAAGCGC CTTCGGCAAC
GAATGGAAGA AGGCCATTGC TTCGCGCACC GAGGCATCGC CCCTCGATTC GCTGACCGAC
GTGGACCTGG CGGCGGAAGA GCGCGGCTAT GTCGAGATCA TGCGCCGCAA GCCCACTGAA
GAAGAGTTCG TCCTGTACCT GAACCACCCC GGCGACGCCA TCAAGACCAT CCAGTTGCGG
GCCCGCTTCG GCAACCCCAA CAACCTGCCG CTGGACGTGT GGTTCGAGGG CGTGGCCCCC
GGCGAGGACC TGAACTTCGT CGATTCCAAC GGCAAGCCGC ACCATCTGGC GCTGCTCAGC
ATCTCTCGCC CCAACGAGGC GGGCATGAGC GTGGTTCGCT ACGTGCTTGA TTCCGAGTTC
ATGAGCTGCG AGGTGCAGGT GGCCAAGGCC GCCGTGGCGG ACGGCAAGGG CTCGGAAAAG
GCCGACCCGT CCAACCCCAT GCACGTGGCC GCGCCCAGCA ACGGCGACCT GTGGGTGATG
TACGTGCACC CCGGCGACGT GGTGAAGCAG GGCGAGGAGT TGTTCAACAT CTCCATCATG
AAGCAGGAAA AGGCGGTGCT GGCCCCGGTT TCCGGCATGG TCAAGCGCGT GCTGAAGACC
GCCGACTACC GCGAAAGCAA GCAGATGATG CCCGTCCGCG AGGGCGAGCT GATCGTGGAG
CTCGGGCCCA TCCCGCGCAC CTGCCCCAAC GCGGCGTGCT CGCGGCCCAT CACCATGGAA
GGCATCGACT TCTGCCCCTA CTGCGGCGAA CCGCTGAACC CATAA
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| Protein sequence | MGIKTFEQVL EEVRGKAILV ANRGIPARRI CRSIRERFDA VAVMTATDID KTSPAASAAQ
ELLLLGSDPR AYLDIDHIIA LAKQRGIVAI HPGWGFASED ERFPAKCKAA GLTFIGSTAE
AMNLLGNKVQ VRKLAKKLDI PVVPGSEGAV DIPTARTIID EIGLPVMLKA EGGGGGRGIF
AIHRAEELSD AFMKASTMAQ ASFGNPRLYV EKYLPSVRHI EIQVIADMYG NVFAFDERDC
TVQRNHQKLI EITPSPWSGI TPELRERLKE YSRMLVREVG YHSLCTVEFL VTADGTPYLI
EVNTRLQVEH GITECRYGID LVEEQIAVAF GARLRFTEEN TTPQHVAMQV RINCEDPQNH
FAPNSGLVSR YVSPGGPGVR LDSNMCAGYE FPSNYDSAGS LLIAYGQGWE KVLGIMERCL
GEYVIGGIKT TVPFYKQVLK HPKFRAGDLD TNFIANTPEL MCYSDLAPEA ERLARLVAEV
SAKGYNPYVQ LGEYRTRETP RMPRFEPVLP HIPGTVRRAP SPYPTGDRTA LLDYLRDAGH
VHFTDTTPRD MTQSNSGNRF RLAEDALIGP YLDNCGFFSI ENGGGAHFHV ALLANMTYPF
SEAKEWNRFA PKTLKQILIR STNVLGYKPQ PKNLMRMTGE MVCDTHHIIR CFDFLNHIEN
MRPFAEVALN RTDVVFEPAL SLSWAKGFDV DHYLGVTEEV LRMVGSVAGV GPDQAARMII
LGLKDMAGMC PPRFMTALVT ALRKRWPSLV LHYHRHYTDG LFVPSVGAAA KAGAHIVDVA
LGASVRSYGQ GDVLATAAYL EDELGLKTNL NKNMIRDCNF VLKQIMPYYD RYCAPYFQGI
DHDVVEHAMP GGATSSSQEG AMKQGYIHLL PYMLKFLAGT RKIVRYHDVT PGSQVTWNTA
FLAVTNAYKR GGEEEVRYLL EVLDHVARHD EADLTAEMRK ARLSIYQDCN DAFRNLLLGR
FGKLPLGFPA DWVYESAFGN EWKKAIASRT EASPLDSLTD VDLAAEERGY VEIMRRKPTE
EEFVLYLNHP GDAIKTIQLR ARFGNPNNLP LDVWFEGVAP GEDLNFVDSN GKPHHLALLS
ISRPNEAGMS VVRYVLDSEF MSCEVQVAKA AVADGKGSEK ADPSNPMHVA APSNGDLWVM
YVHPGDVVKQ GEELFNISIM KQEKAVLAPV SGMVKRVLKT ADYRESKQMM PVREGELIVE
LGPIPRTCPN AACSRPITME GIDFCPYCGE PLNP
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