Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0398 |
Symbol | |
ID | 7172284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 469064 |
End bp | 469867 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643538897 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002434823 |
Protein GI | 218885502 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.110488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA CAGCTGCCAC CACCCGCGCC ACTTCCGCCC CATCTACCTC ACGCGGGGGC ATCGTCTGCA TCACCGGGGC CACCGCCGGG TTCGGCGCGG CCACTGCCCG CCGCTTCGCC GCCGAAGGCT GGCGCATCAT CGCCACCGGG CGTCGCCAGG ACCGGCTGGA TGCGCTGGTC ACGGAACTGG GCGACGGCAA CTGCCTGCCG CTGTGCTTCG ACGTGCGCGA CGGCGATGCG GTGCAGGCCG CGCTTGGGAA CCTGCCCGAG GCGTGGCGCG CCGTGGACGT GCTGGTGAAC AACGCGGGCC TGGCGCTGGG GCTGGAACCC GCCCACCGTT GCAGCATGGA CGACTGGATG ACCATGGTGG ACACCAACAT CAAGGGGCTG CTGCACGTCA CTCGCGCCCT GCTGCCCGGC ATGGTGGAGC GGGGGCGCGG CCACGTGGTC AACCTGGGGT CCATCACCGG CACCTATGCC TACCCCGGCG CCAACGTGTA TGGTGGCACC AAGGCCTTCG TGATGCAGTT TTCGCGCGGC CTGCGGGCAG ACCTGCACGG CACCGGCGTG CGGGTGACCA ACATCGAGCC GGGGCTTGCG GAAAGCGAGT TTTCCGTGGT GCGCTTCGGC GGTGATGCCG ACCGCGTCGC CAAACTGTAT GAAGGCGCAT CCGCCCTGCG CCCGGAAGAC ATTGCCGACA CCATCGCCTG GGCCGTGTCC TGTCCTGCGC ACGTCAACGT GAACCGCATC GAGGTCATGC CCACCAGCCA GTCCTTCGGC GCGCTGCCCG TTCACCGCGC CTGA
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Protein sequence | MTATAATTRA TSAPSTSRGG IVCITGATAG FGAATARRFA AEGWRIIATG RRQDRLDALV TELGDGNCLP LCFDVRDGDA VQAALGNLPE AWRAVDVLVN NAGLALGLEP AHRCSMDDWM TMVDTNIKGL LHVTRALLPG MVERGRGHVV NLGSITGTYA YPGANVYGGT KAFVMQFSRG LRADLHGTGV RVTNIEPGLA ESEFSVVRFG GDADRVAKLY EGASALRPED IADTIAWAVS CPAHVNVNRI EVMPTSQSFG ALPVHRA
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