Gene DvMF_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0398 
Symbol 
ID7172284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp469064 
End bp469867 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID643538897 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002434823 
Protein GI218885502 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.110488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CAGCTGCCAC CACCCGCGCC ACTTCCGCCC CATCTACCTC ACGCGGGGGC 
ATCGTCTGCA TCACCGGGGC CACCGCCGGG TTCGGCGCGG CCACTGCCCG CCGCTTCGCC
GCCGAAGGCT GGCGCATCAT CGCCACCGGG CGTCGCCAGG ACCGGCTGGA TGCGCTGGTC
ACGGAACTGG GCGACGGCAA CTGCCTGCCG CTGTGCTTCG ACGTGCGCGA CGGCGATGCG
GTGCAGGCCG CGCTTGGGAA CCTGCCCGAG GCGTGGCGCG CCGTGGACGT GCTGGTGAAC
AACGCGGGCC TGGCGCTGGG GCTGGAACCC GCCCACCGTT GCAGCATGGA CGACTGGATG
ACCATGGTGG ACACCAACAT CAAGGGGCTG CTGCACGTCA CTCGCGCCCT GCTGCCCGGC
ATGGTGGAGC GGGGGCGCGG CCACGTGGTC AACCTGGGGT CCATCACCGG CACCTATGCC
TACCCCGGCG CCAACGTGTA TGGTGGCACC AAGGCCTTCG TGATGCAGTT TTCGCGCGGC
CTGCGGGCAG ACCTGCACGG CACCGGCGTG CGGGTGACCA ACATCGAGCC GGGGCTTGCG
GAAAGCGAGT TTTCCGTGGT GCGCTTCGGC GGTGATGCCG ACCGCGTCGC CAAACTGTAT
GAAGGCGCAT CCGCCCTGCG CCCGGAAGAC ATTGCCGACA CCATCGCCTG GGCCGTGTCC
TGTCCTGCGC ACGTCAACGT GAACCGCATC GAGGTCATGC CCACCAGCCA GTCCTTCGGC
GCGCTGCCCG TTCACCGCGC CTGA
 
Protein sequence
MTATAATTRA TSAPSTSRGG IVCITGATAG FGAATARRFA AEGWRIIATG RRQDRLDALV 
TELGDGNCLP LCFDVRDGDA VQAALGNLPE AWRAVDVLVN NAGLALGLEP AHRCSMDDWM
TMVDTNIKGL LHVTRALLPG MVERGRGHVV NLGSITGTYA YPGANVYGGT KAFVMQFSRG
LRADLHGTGV RVTNIEPGLA ESEFSVVRFG GDADRVAKLY EGASALRPED IADTIAWAVS
CPAHVNVNRI EVMPTSQSFG ALPVHRA