Gene DvMF_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvMF_0369 
Symbol 
ID7172253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris str. 'Miyazaki F' 
KingdomBacteria 
Replicon accessionNC_011769 
Strand
Start bp434506 
End bp435261 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID643538867 
Productpseudouridine synthase 
Protein accessionYP_002434794 
Protein GI218885473 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value0.126334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCG GCGAAGTGCG CCTGAACAAG GCCATTGCCG GGGCGGGGGT GTGTTCGCGG 
CGTCAGGCGG ACGACCTCAT ACAGCAGGGG GTGGTGCGGG TCAACGGCGA GGTGGTGGAC
ACCCCCGGAG CGCGCGTGGT GCCGGGGCGC GACCGCATCG AGGTGCGCGG CCAACTGCTG
GAACTGGATG CCGCGCCCGC CGCGTTCACC TACGTGATGC TGCACAAGCC GGTGCAGGTT
GTCTCCACCG TGCGCGACCC GCAGGGGCGG CCCACGGTGC TGGGCATCCT GCCGCCCGAC
CTGCGCGGCG GACGGCTGTA TCCCGTGGGC AGGCTGGACT ATTTTTCCGA GGGGCTGCTG
ATCCTCACCG ATGACGGCGA CCTTACCAAC CGGCTCACCC ACCCCCGCTA CCACCTTCCC
AAGGTCTACA TGGTCAAGGT GCGCGGCCAC GTGACCGAAT CCACCCTGGC CCCCATGCGC
CAGGGCATGA CCCTGGCCGA GGGCGAAAAG CTTGCGCCCG TGGACGTGCG CCTGTTGCAG
TCGGACCGCC AGGCCAGCCT TTTCGAGATG ACCCTGCACC AGGGCGTGAA CCGCCAGATT
CGCCGGATGT GCCGCGATCT GGGGCTGACG GTGCTGCTGC TGCGGCGTGT GCGGCAGGGG
CCGCTGGAAC TGGGCGAATT GCCCAAGGGC GCGGCCCGCC GCCTGACCCC GCACGAGGTG
GCAGCCCTAC GCCGCGCCGC CGGTCTGGAA GGCTGA
 
Protein sequence
MQPGEVRLNK AIAGAGVCSR RQADDLIQQG VVRVNGEVVD TPGARVVPGR DRIEVRGQLL 
ELDAAPAAFT YVMLHKPVQV VSTVRDPQGR PTVLGILPPD LRGGRLYPVG RLDYFSEGLL
ILTDDGDLTN RLTHPRYHLP KVYMVKVRGH VTESTLAPMR QGMTLAEGEK LAPVDVRLLQ
SDRQASLFEM TLHQGVNRQI RRMCRDLGLT VLLLRRVRQG PLELGELPKG AARRLTPHEV
AALRRAAGLE G