Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DvMF_0369 |
Symbol | |
ID | 7172253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
Kingdom | Bacteria |
Replicon accession | NC_011769 |
Strand | + |
Start bp | 434506 |
End bp | 435261 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643538867 |
Product | pseudouridine synthase |
Protein accession | YP_002434794 |
Protein GI | 218885473 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 0.126334 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCG GCGAAGTGCG CCTGAACAAG GCCATTGCCG GGGCGGGGGT GTGTTCGCGG CGTCAGGCGG ACGACCTCAT ACAGCAGGGG GTGGTGCGGG TCAACGGCGA GGTGGTGGAC ACCCCCGGAG CGCGCGTGGT GCCGGGGCGC GACCGCATCG AGGTGCGCGG CCAACTGCTG GAACTGGATG CCGCGCCCGC CGCGTTCACC TACGTGATGC TGCACAAGCC GGTGCAGGTT GTCTCCACCG TGCGCGACCC GCAGGGGCGG CCCACGGTGC TGGGCATCCT GCCGCCCGAC CTGCGCGGCG GACGGCTGTA TCCCGTGGGC AGGCTGGACT ATTTTTCCGA GGGGCTGCTG ATCCTCACCG ATGACGGCGA CCTTACCAAC CGGCTCACCC ACCCCCGCTA CCACCTTCCC AAGGTCTACA TGGTCAAGGT GCGCGGCCAC GTGACCGAAT CCACCCTGGC CCCCATGCGC CAGGGCATGA CCCTGGCCGA GGGCGAAAAG CTTGCGCCCG TGGACGTGCG CCTGTTGCAG TCGGACCGCC AGGCCAGCCT TTTCGAGATG ACCCTGCACC AGGGCGTGAA CCGCCAGATT CGCCGGATGT GCCGCGATCT GGGGCTGACG GTGCTGCTGC TGCGGCGTGT GCGGCAGGGG CCGCTGGAAC TGGGCGAATT GCCCAAGGGC GCGGCCCGCC GCCTGACCCC GCACGAGGTG GCAGCCCTAC GCCGCGCCGC CGGTCTGGAA GGCTGA
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Protein sequence | MQPGEVRLNK AIAGAGVCSR RQADDLIQQG VVRVNGEVVD TPGARVVPGR DRIEVRGQLL ELDAAPAAFT YVMLHKPVQV VSTVRDPQGR PTVLGILPPD LRGGRLYPVG RLDYFSEGLL ILTDDGDLTN RLTHPRYHLP KVYMVKVRGH VTESTLAPMR QGMTLAEGEK LAPVDVRLLQ SDRQASLFEM TLHQGVNRQI RRMCRDLGLT VLLLRRVRQG PLELGELPKG AARRLTPHEV AALRRAAGLE G
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