| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0359 |
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| Symbol | |
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| ID | 7172243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 421576 |
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| End bp | 422448 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643538857 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_002434784 |
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| Protein GI | 218885463 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 0.00723526 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGATGGCT ATCTGGAATA CCTGCTCATC GAACGCGGCC TTGCGGAAAA CACCCTGGCC
GCCTACGCGG CGGACCTGGC CGACTTCGCG GGCTTTCTCG CGCAGGGCGG CATCGACCTT
GAAGCCGCCA CGGAACAGAC CCTGTTCCTG TACATCGTGG ACCTGCGGCG GCGCGGCCTG
ACCAGCCGCA CCCTGTCCCG CCATCTTTCG GCCCTGCGCG GGCTGTTCGC CCACGGCGTG
GCCCAGGGAC AGCTTGCGGC AGACCCGCTG CGCTATCTGG AAAACCCCAA GCTGCCGCGC
ACCCTGCCCG ACGTGCTGAC CCGCGATGAA ATGGCCGCCG TGCTGGCCCG GCCCGACCTG
TCCGACCGGC TGGGCTTTCG CGACCGCACC ATGCTGGAGC TGCTGTACGC CTCCGGCCTG
CGCGTCTCGG AACTGTGCGG CTTGCGCCCG CTGGATTTCG ATCCCATGAC CGGCCTTGTG
CGGGTATTCG GCAAGGGGTC CAAGGAACGC ATCGTGCCGG TGCACGACAC GGCGGCCAAA
CTGCTGTCGG CCTACATCCG CGACTGGCGG CCCGCCTTCC GCCCGGTGGA GGACGCCCTG
TTCCTGAACC GGTCCGGCAA GGGACTGACC CGTCAGGCGG TGTGGAAGGT GGTCAAGCGC
CACGTGGCCG AGGCGGGCAT CCGCAAGGAC ATTTCGCCGC ACACCTTTCG CCATTCCTTC
GCCACCCACC TGCTGGACGG CGGGGCCGAC CTGCGCACCG TGCAAATGCT GCTGGGCCAC
GCCGACATTG CCGCCACGGA AATCTACACC CACGTGCAGG CCGACCGGCT GCGCCAGGTG
CATCGCGCCC ATCACCCCCG CTCGCGCTCC TGA
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| Protein sequence | MDGYLEYLLI ERGLAENTLA AYAADLADFA GFLAQGGIDL EAATEQTLFL YIVDLRRRGL
TSRTLSRHLS ALRGLFAHGV AQGQLAADPL RYLENPKLPR TLPDVLTRDE MAAVLARPDL
SDRLGFRDRT MLELLYASGL RVSELCGLRP LDFDPMTGLV RVFGKGSKER IVPVHDTAAK
LLSAYIRDWR PAFRPVEDAL FLNRSGKGLT RQAVWKVVKR HVAEAGIRKD ISPHTFRHSF
ATHLLDGGAD LRTVQMLLGH ADIAATEIYT HVQADRLRQV HRAHHPRSRS
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