| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0340 |
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| Symbol | |
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| ID | 7172223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 397375 |
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| End bp | 398094 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 643538837 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_002434765 |
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| Protein GI | 218885444 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.240035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACCT TTTTCCTGCC GCCCGAACGC TGGGCCGAAC CGTACCTGCT CGAAGGGCAG
GAGGCCCGCC ACCTGGTCAA GGTGGTGCGG GTGCGCGTGG GCGACTCGGT GCGTCTGCTG
GATGGCCGGG GGCGCGAGGG CGAATTCCGG GTGACGGACA CGGAAAAGGC CTTGGTGCGT
CTGGAGCCGG TGTCGATCAC CGAGCATCCG GCCCCGGCAT CGCAGGCGGT GCTGGCCATC
GGCTGGGGCA AGGAAGTGCG CCGGGGCTGG CTGATGGAAA AGGCGGTGGA ACTGGAGGCG
GGCGGCATCT GGCTGTGGCA GGCGGAGCGC AGCCAGTCGC GCGTGCCCGA GGAAACCCGC
GAATCATGGC ACGCCCAGAT GGAGGCCGGG GCCAAGCAGA GCCGCAACCC GTGGCTGCCA
GAACTGCGCA CCCTGCCCGG CGGCGTGGCC GAACTGGCCG AGGCCAGCCG CGATTTCGCC
AAGCGGTTCA TCCTGTGGGA AGGCGACACC GGCGGCGTGC TGCTGGGCGC CGGAGACATC
GGCCAGCCGG GCCGCACCCT GTTCGTGGTG GGCCCGGAGG GCGGTTTTTC CGACCGCGAG
GTGGCGGCGC TTCTGAATTC CGGCATGCAG GCCGTAAGCC TTGGCAACCG GGTGCTGCGC
TGGGAAACGG CGGCCATGCT CTGCCTGGGG CTGCACTGGT GGGCCCGGCA GGGACGGTAG
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| Protein sequence | MRTFFLPPER WAEPYLLEGQ EARHLVKVVR VRVGDSVRLL DGRGREGEFR VTDTEKALVR
LEPVSITEHP APASQAVLAI GWGKEVRRGW LMEKAVELEA GGIWLWQAER SQSRVPEETR
ESWHAQMEAG AKQSRNPWLP ELRTLPGGVA ELAEASRDFA KRFILWEGDT GGVLLGAGDI
GQPGRTLFVV GPEGGFSDRE VAALLNSGMQ AVSLGNRVLR WETAAMLCLG LHWWARQGR
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