| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0309 |
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| Symbol | rpsA |
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| ID | 7172191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 357123 |
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| End bp | 358817 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643538805 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_002434734 |
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| Protein GI | 218885413 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 72 |
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| Fosmid unclonability p-value | 0.470191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGTG AACGCACCGA AGCCACCGGG CTGCAAGCCC AGGAGGCCAC CACCGAAACC
GGACAGGCGG AAGCCACCGC CCCCGAAGCC ACCACCGCGC CTGCCCCGCA GGACATGGCT
GGTGACGACG CATTCGACGA GAACGCCAGC TTCGCGGACC TGCTGGAGGC ACATTCCGGC
GCGGCTGAAA CCGTGCGCAC CGGCGAACGG GTGAAGGCCA CCGTGGTGGC CATCGGCGAG
GACACCGTCT TCGTCGCCAC CGGAGCCAAG GTGGACGGTC TTGTGGACCG CAAGGAGCTG
GAAGACGCCG AAGGCAACCT GCCCGTGGCT GTGGGCGATG TGCTGGAACT GTACGTGGTT
TCCGCCAACG CCAATGAAAT CAAACTGTCC CGCGCCATGG GCGGTCAGGT GGGCCTGGCC
CAGATGGAAG ACGCCCTGAA CGCGGGCATC CCCATTGAAG GCAAGGTTAC CGGCCCCTGC
AAGGGCGGCT TCAACGTTGA AGTCCTGAAA CGCCGCGCCT TCTGCCCGGC CAGCCAGATG
GACCTGCGCC CCGGTGCCGA GCCCGACTCG TTCACCGGCC AGACCTTCCA GTTCCTGATT
ACCCGCCTGG AGCAGAACGG CCGCAACATC GTGGTTTCGC GCCGCATGCT GCTGGAGCGC
GAACAGGCCG AATCGCTGAG CGCCCTCATG GAAAACGTGA AGGAAGGCGA CGTGCTGGAA
GGCACCGTGG CCCGCCTTGC CCCGTTTGGC GCCTTTGTGG AAATCGCCCC CGGCCTTGAA
GGCATGGTGC ACGTTTCCGA GCTTTCGTGG TCGCGCGTGC AGCAGGCCGA CGAAGCCGTA
AGCGTGGGCG ACAAGGTGCG CGTGAAGGTG CTGGGCATTG CCGGCGCGGA AGAAGGCAAG
GGCGGCAAGG ATTCCCGCAA GGGTCCGCGC ATCTCCCTGT CCATCCGCCA GGTGTCCGGC
GACCCGTGGC AGGACGTGGC CGACCGCCTG GACGCCGACC AGATCCTGAC CGGCAAGGTC
ACCCGCCTCG CCCCGTTCGG CGCCTTCATC GAGGTGCTGC CCGGCGTGGA AGGCCTGGTG
CACCTTTCCG AAATGTCCTG GACCCGCCGC ATCAACAAGC CCGAAGAGGC CGTGACCCCC
GGCGAGACCG TGTCCGTCAG GATCAAGGAA TTGGACCCCG CCCGCAAGAG GCTGTCCCTG
AGCCTGCGCG ACGCGGAAGG CGACCCGTGG TCCACGGTGG AAGAACGCTT CCCCGCCGGT
TCCACCGTCA CCGGCACCGT GGAAAAGCGC GCGCCCTTCG GCCTGTTCGT GAACCTGGCC
CCCGGCGTCA CCGGGCTTCT GCCCAACGCC GTGGCCGCCA CCTCGCCCCA GTCCAAGACC
TACGCCGGGC TGAACCCCGG CGCGGAAGTC TCGCTGGTGG TGCGCGACCT GGACGTGAAG
GCCCGCCGCA TCTCGCTGGC CCCGGCGGAC GCAACCGGCG AGGACGACGA CGAATGGCGC
AAGCTTGCCC AGCCCCAGAA GCGCGAGCCG CGCGAAGGGC GCGGAGGCAG CCGTGACGGG
GCCCGCCCCG GTGGCCGCGA TGGAGGTCGC GGTTCACGTT CCTCTGCCCC GGCCACCGTG
GTGTCCGGCG ATTCCAGCGG CTTCGGCAGC CTGGGCAGCG CCCTTCAGGC CGCCCTGGAC
AAGCGCAAGA AGTAG
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| Protein sequence | MTGERTEATG LQAQEATTET GQAEATAPEA TTAPAPQDMA GDDAFDENAS FADLLEAHSG
AAETVRTGER VKATVVAIGE DTVFVATGAK VDGLVDRKEL EDAEGNLPVA VGDVLELYVV
SANANEIKLS RAMGGQVGLA QMEDALNAGI PIEGKVTGPC KGGFNVEVLK RRAFCPASQM
DLRPGAEPDS FTGQTFQFLI TRLEQNGRNI VVSRRMLLER EQAESLSALM ENVKEGDVLE
GTVARLAPFG AFVEIAPGLE GMVHVSELSW SRVQQADEAV SVGDKVRVKV LGIAGAEEGK
GGKDSRKGPR ISLSIRQVSG DPWQDVADRL DADQILTGKV TRLAPFGAFI EVLPGVEGLV
HLSEMSWTRR INKPEEAVTP GETVSVRIKE LDPARKRLSL SLRDAEGDPW STVEERFPAG
STVTGTVEKR APFGLFVNLA PGVTGLLPNA VAATSPQSKT YAGLNPGAEV SLVVRDLDVK
ARRISLAPAD ATGEDDDEWR KLAQPQKREP REGRGGSRDG ARPGGRDGGR GSRSSAPATV
VSGDSSGFGS LGSALQAALD KRKK
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