| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0307 |
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| Symbol | hslU |
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| ID | 7172189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 353685 |
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| End bp | 355136 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643538803 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_002434732 |
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| Protein GI | 218885411 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 0.338711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACC TCACCCCCCG TGAAATCGTT TCGGAACTGG ACAAGTACAT CGTGGGCCAG
AACGCCGCCA AGCGCATGGT GGCCGTGGCC ATGCGCAACC GCTGGCGCCG CCAGCAGCTG
GACCCGGCCC TGCGCGACGA GATAGCCCCC AAGAACATCA TCATGATGGG CCCGACCGGC
GTCGGCAAGA CCGAGATCGC CCGGCGGCTG GCCAAGCTTT CCGCGTCGCC GTTCATCAAG
GTGGAGGCCA CCAAGTTCAC CGAGGTGGGC TACGTGGGCC GCGACGTGGA ATCCATGGTG
CGCGACCTGA TGGAAATCGG CATCGCCCTG GTGCGGGCCG AGGAAAACGA GAAGGTGCGC
GTGAAGGCCG AGGCCCGCGC AGAGGAACGC CTGCTGGACC TGCTGCTGCC CGGCGGCGCG
CCCCAGCCTG CCCCGGCACA AGGCATGGGC GGCCTGACCT TCGACCTTTC CGCCAGCCAT
TCTGGCGGAC AGGCCATTCC CCAGCCCCCG GCGCAGGCCG ATGCGTCCCA AGCGTCCCCG
CCCACGGGCA CCGGCTCCGC GCCGGACAGC CGCTCATCCA CCCGAGAAAA ACTGCGCACC
CTGTGGCACG GCGGCAAGCT GGACGACCGC GAGGTGGACA TGGAGGTGGA GGAATCCGGC
GGGCCGCAGG TGGGCGTGCT GTCCATGCCG GGACTGGAGG ACGTGGGCTC GCAGGTGCGC
GACATGTTCA GCAAGGTCTT TCCCTCGCGC CGCAAGCGCC GCCGCATGAA GGTGCGCGAC
GCCTTCAACC TGCTGACGCA GGAAGAGGCC GACCGGCTCA TCGACCACGA CCGAGTGTCC
GACCTGGCCC GCGAACGCGT GGAGCAGACC GGCATCATCT TCATCGACGA AATCGACAAG
ATCGCCAGCG GCAGTACCCA GAAAAGCTCC GACGTCTCGC GCGAAGGGGT GCAGCGCGAC
CTGCTGCCCA TCGTGGAAGG CAGCGTGGTC AACACCAAGT ACGGCATGGT GCGCACAGAC
CACATCCTGT TCATCGCCGC CGGGGCGTTC CATTTCAGCA AGCCCTCGGA CCTGATTCCG
GAATTGCAGG GGCGCTTTCC CCTGCGGGCG GAGTTGTCCG CGCTGGGAAA GGACGACTTC
CTGCGCATCC TCACCGAGCC GCACAACGCG CTTACCCGGC AGTACACCGC GCTGCTGCAA
ACGGAAGGCG TGCACATCGA ATTCACCGGC GACGCCTTGC GCGAAATCGC CGCCTTTGCC
GAAGAAACCA ACGCCCAGAC AGAAAACATC GGGGCGCGGC GGCTGTACAC CATCCTGGAA
AAGATTCTGG CCGACCTTTC GTTTGAGGCG CCCGACCGCT CCGGCGACCG GGTGACCGTG
GACAGCGACT ACGTGCGCGA GCACCTGGCC GACGTGCGCG CCAACAAGGA TCTCAGCCGC
TACATCCTGT AG
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| Protein sequence | MSNLTPREIV SELDKYIVGQ NAAKRMVAVA MRNRWRRQQL DPALRDEIAP KNIIMMGPTG
VGKTEIARRL AKLSASPFIK VEATKFTEVG YVGRDVESMV RDLMEIGIAL VRAEENEKVR
VKAEARAEER LLDLLLPGGA PQPAPAQGMG GLTFDLSASH SGGQAIPQPP AQADASQASP
PTGTGSAPDS RSSTREKLRT LWHGGKLDDR EVDMEVEESG GPQVGVLSMP GLEDVGSQVR
DMFSKVFPSR RKRRRMKVRD AFNLLTQEEA DRLIDHDRVS DLARERVEQT GIIFIDEIDK
IASGSTQKSS DVSREGVQRD LLPIVEGSVV NTKYGMVRTD HILFIAAGAF HFSKPSDLIP
ELQGRFPLRA ELSALGKDDF LRILTEPHNA LTRQYTALLQ TEGVHIEFTG DALREIAAFA
EETNAQTENI GARRLYTILE KILADLSFEA PDRSGDRVTV DSDYVREHLA DVRANKDLSR
YIL
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