| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_0275 |
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| Symbol | |
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| ID | 7172157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 314929 |
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| End bp | 316551 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643538771 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_002434700 |
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| Protein GI | 218885379 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.159728 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC GCATACAGTT GTACGACACC ACCCTGCGTG ATGGTTCGCA ATCCGAGGAC
ATCAACCTCA CTGCGGCAGA CAAGCTGAAG ATCGCCCTCA AGCTGGACGA GATCGGCATC
GACCGCATCG AGGGCGGGTG GCCGGGGTCG AACCCGGTGG ACGTGGCGTT CTTCAAGGAA
ATCGCCAACT ATCACCTCAA ACATGCGGTG ATCAGCGCCT TCGGCAGCAC GCATCACCCC
AACTTCACGG CGGACAGCGA CCCCAACCTG CGCGCCATCG CGGAATCCGG GGCGCGGGTG
GCCTCCATCT TCGGCAAGTC GTGCGAAGTG CACGCCGCAG AGGCCCTGCG TCTGGACGCA
GCGCGCAACC TGGAGATCAT CGGCGACTCG GTGGCCTTCC TGAAGGGAAA GCTGGCCGAG
GTGTACTTTG ACGCGGAGCA CTTCTTCGAC GGGTACAGGC ACAACGCCGC CTATGCGCTC
AGCGCGCTGC GCCGCGCCCA CGAGGCGGGC GCCGACGTGC TGGTGCTGTG CGACACCAAC
GGCGGCACCC TGCCGCACGA GGTGGCGCGC ATCGTGACCG AGGTGCGCGA GGCCCTGCCC
GGCGCCGCGG TGGGCATCCA CGCCCACAAC GACTGCGAGC TGGCCGTGGC CAACTCCATC
GCGGCGGTGC AGGCCGGTGC CGTGCAGATT CAGGGCACCA TCAACGGGGT GGGCGAACGC
TGCGGCAACG CCAACCTGTG CTCCATCATC CCCACGCTGG AACTGAAGTT CGGCGGGGAA
TACACCTGCC TGCCCGAAGG CCGGTTGCAA CAGCTCACGG CGGTGGCCGC CTACGTCTCG
GAAGTGGCCA ACATCCCGCC GTTCAGCCGC CAGCCGTACG TGGGCCGGTC GGCCTTTGCC
CACAAGGGCG GGGTGCACGT CAGCGCGGTG AACCGCAAGT CGTCGCTGTA CGAGCACATC
AGCCCCGACG TGGTGGGCAA CCGCCAGCGC ATCCTGATCA CCGAACTGGC CGGGCGCAGC
AACATCGTCT CGCTGGCGCG GCGCTTCGGC TTTCACCTGG ACAAGGACGA ACCGGTGGTC
AAGGGCCTGC TGACCGAACT GAAGAAGAAG GCCAGCCTGG GCTACGACTA CGCCGCCGCC
GAAGCATCGG TGGAACTGCT GATCCTGCGC AAGCTGGCCC GGCGCGGCGT GCGCGAGTTC
TTCCGGCTGT TGCAGTTCCG GGTGCTGGAA ACCAAGCACG ACAGCGAAGG CGAACCGGTT
TCCGAAGTCT CCGTGATGGT GGACGTGGAA GGGGTGACCG AACACACCGC CGCCACAGGG
CGCGGCCCGG TGAACGCGCT GGACAACGCC CTGCGCAAGG CCCTGCTGGG CTTCTACCCG
CGCCTGAGTG AAATGCGCCT GCTGGACTTC AAGGTGCGCG TGCTGACCGG CGCGGAAACC
GGCGGCGGCA CGGCATCCAC CGTGCGGGTG CTCATCGAGT CGGGCGACTC CGACAGCCGC
TGGGTGACCG TGGGCGTGTC GTTCAACATC ATAGAGGCAA GCTGGCAGGC CCTGGCCGAC
TCCGTCACCT ACAAGTTGTA CAAGGACGAA CACGCCCGCA GGGCGGGTTC GGACGGAGAA
TAG
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| Protein sequence | MTRRIQLYDT TLRDGSQSED INLTAADKLK IALKLDEIGI DRIEGGWPGS NPVDVAFFKE
IANYHLKHAV ISAFGSTHHP NFTADSDPNL RAIAESGARV ASIFGKSCEV HAAEALRLDA
ARNLEIIGDS VAFLKGKLAE VYFDAEHFFD GYRHNAAYAL SALRRAHEAG ADVLVLCDTN
GGTLPHEVAR IVTEVREALP GAAVGIHAHN DCELAVANSI AAVQAGAVQI QGTINGVGER
CGNANLCSII PTLELKFGGE YTCLPEGRLQ QLTAVAAYVS EVANIPPFSR QPYVGRSAFA
HKGGVHVSAV NRKSSLYEHI SPDVVGNRQR ILITELAGRS NIVSLARRFG FHLDKDEPVV
KGLLTELKKK ASLGYDYAAA EASVELLILR KLARRGVREF FRLLQFRVLE TKHDSEGEPV
SEVSVMVDVE GVTEHTAATG RGPVNALDNA LRKALLGFYP RLSEMRLLDF KVRVLTGAET
GGGTASTVRV LIESGDSDSR WVTVGVSFNI IEASWQALAD SVTYKLYKDE HARRAGSDGE
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